Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00194 TTGACAAAAACAGAGGCTCCCAAAACAAACGGAACCTCGGATACAAAACTCCCAACATATTATTTTCTTTTTTTCTCCTTAGCTAATACTCCTCTTATCTTTATTTTTAATATTAATACTTTTTTTTGGGTCGGTTTAGATTTTAGAATCCATAAAACTCGTACAAAATCTCACCAGCTTCGAACCAAACACACTTATCCCATATTTCTACATACACAAAAGGTCTTGTTGGTTGTTGAGATAGCCAAGAAGATGGTCGCAAGGTCATGCTTGAATTTGTTGGACCTGGTATCAGGAGATATGCTAAATTTTCCTCAAACTCCCAGATCTCTCCCGCGAGTTATGACTGATCCAGTAATCATATCTGATGGAGATGGTAAACCAAGTAATGATGATTCAAATGTTTTCTCATCAGAGCACCGTCGCAAGATAATTATTGTATCAAATTCTCTTCCTCTCAATGCAAAAAGGGATAGAATATCTGGCAAATGGTGCTTCAGTTATGATGAGGATTCAATTTTTTGGCAATTAAAGGATGGTCTCTCTCCTGATGTTGATATTGTTTATGTGGGATCTCTGAAGGTTGAGGTTGATGCAAATGAGCAAGAGAAAGTTTCCATTCAGTTGCTGGAGGAATTCAATTGCTTGCCTACTTTTATTCCTTCAGACCTCTACAAACAATTCCATGATGGATTCTGCAAGCAACAATTGTGGCCTCTATTCCATTACATGTTGCCCATGTATCCAGGCAATCACCGTTTTGATAGATCTCAGTGGCAGGCTTATGTTTCTGCCAACAAGATATTTGCAAATAAAGTCATGGAGGTCCTCAATCCAGAAGATGATTATGTATGGGTTCATGATTATCATCTTATGGTTCTTCCAACCTTTCTGCGAAAACGGTGTACCCGAGTCAGGCTTGGTTTTTTCCTCCACAGTCCATTTCCATCATCAGAAATTTATAAAACTCTTCCTGTCAGAGGTGAAATTTTGAAAGCACTGCTTAATGCAGATTTAATTGGTTTCCACACCTTTGATTATGCTCGCCATTTTCTGTCCTGCTGTAGAAGAATGCTTGGCTTGGAACATGAATCCAAGAGGGGTTACATTGGGCTTGAATATTTTGGCCGTACAATATTCATCAAAATATTGCCTGCTGGGATTCACATGGGTCGACTTCGATCTGCCTTAGATCACCCTTCCTCTTCTGACAAAGTCAGAGAAATCCACCAACGATTTAAGGGGAAAAAGCTTATTCTTGGTGTTGATGATATGGACATATTCAAAGGTGTCAGTTTAAAATTCTTAGCCGTAGAACAACTCCTGCAGCAATATCCAGAACTGCAAGGTGAATTGATACTTATCCAAATTTTGAATCCCCCAAATAGTGCTGACAAGGATGTTGAGGATGCAAAGGAGGAGACCTACATTACAGCCAAAAGGATAAATGAAAGGTTTGGTTTGGAAGATTATGAACCTATCATCATCATTGATCGCCATGTTCCCTTCTATGAGAAGGCAGCCTATTATGCTTTGGCAGATTGTTGCATTGTGAATGCAGTGCGTGATGGTTTAAATTTGGTTCCATACAAGTACACTGTCTGTAGACAGGGAAGTTCTAAAATAGATGAAGCCTTAGAAATTGCTTCTGACTCCCCACGTGTAAGTGCACTTGTTGTTTCTGAGTTTATAGGTTGCTCACCATCTCTTAGTGGGGCAATAAGGGTAAACCCATGGGATATTGATGCAGTAGCTGAAGCACTAAATTTGGCCGTCACAATGCCTGATGGAGAGAAGCAGCTTCGACATGAGAAGCATTTTCGATATGTTAGTTCTCATGATGTGGCTTATTGGGCTCGAAGCTTTGAACAAGATCTAGTATTCTCATGCAAGGATCAGCATAGAAACCGTTGTTGGGGCATTGGTTTTGGCCTGAACTTCAGAATTTTGTCCCTGTCTCCTAATTTCAGGAGGCTATCCATAGACCACATTGTCCCCGCATATAAAAGGAGCAGCTGCAGAGCAATATTTTTGGATTATGATGGTACAGTTGTACCTCAAGCTTCCATTGTTAAACCCCCCAGTCCTGAAGTCATATCCGTACTAAATAATCTTTGCAGTGATCTTAACAACACTGTGTTCATTGTTAGTGGCAGGGGAAAACCCTCACTGAGTGAATGGTTTGATCAGTGGGGTAAACATACTAGTTGGCAAATGAGTCATGCAGATACAGATTTTGCATGGAAAAGGATTGCTGAACCTGTGTTGAGATCTTACATGGAGGCCACAGACGGCTCCTCTGTAGAGTCGAAAGAGAGTGCATTGGTATGGCATTACCGTGATGCCGATCCTGATTTTGGATCTTGGCAAGCCATGGAGTTGTTGGATCACCTTGAAAATGTACTTGCAAATGAGCCTGTAGTTGTAAAAAAGGGGCAGCATATTATTGAAGTCAAACCTCAGGGCATTACTAAAGGGTTAGCTGTTCAGGAAGTTCTTTCTACACTAACCAAGAAGGGTAAATCACCAGATTTTGTACTGTGTATTGGTGATGATAGATCTGATGAGGATATGTTTGAGAGCATATTAACCAAAGCTTATAATGCTACCTCCTCCTCAGCACCACAAATCTTTGCATGCACTGTTGGACAAAAACCGAGCAAAGCTAGATACTACCTAGATGACACTGTGGATGTGATGAACTTACTCGAGGGTCTTGCAGCTGTTTCAGGGCCTAAATCAAGATATTCTACAGAAGCCCCTTTTGAAAAAAGAGAAGTATGTTTTGAACATATTGATTAAAAGAACACTTGAAATGTCTAGGCACCAGCATAGGAGAAAGGCACAGTTTTGATGGTTGTTTCTGCTAAGATGCACAAAAGCATGATTTAAGGAAATAGCTTTAAATCTGTCTTTTGATTGTAAAGAATGTTGCTAGCAGCTTTAGGTCTCAGAAACTGAGCACAGGGGATTATAGTGATTGGTTTTGATTGGTTGGTGGGGACAAACGGATGAATCTGTTGGCTTTAGCAGTAGCTTTGAAAGGGTACTGAATAGTATGTTAATAGATACAGAATCTAGGCATTCTTCCCGGGTGATAATTCATTGGTTGTATATTTGAACTCGTTGGGTTTTATACGTGAATGTCATTCAGAATCTCATATCAATCACTTTTGTGTACTTTTTTGTTTGGGGAAATGGGTCTGGATGTAATTTATCTAACGTAAGTGCATCGTATTATTTTTTGGTTCAATATTGAACCATTTTCTTTTATATTTGATTCAATATGAAGAAATGAAGCCGGACACATCCCTATTTATTTCTCTCAATA 3331 0.396 LTKTEAPKTNGTSDTKLPTYYFLFFSLANTPLIFIFNINTFFWVGLDFRIHKTRTKSHQLRTKHTYPIFLHTQKVLLVVEIAKKMVARSCLNLLDLVSGDMLNFPQTPRSLPRVMTDPVIISDGDGKPSNDDSNVFSSEHRRKIIIVSNSLPLNAKRDRISGKWCFSYDEDSIFWQLKDGLSPDVDIVYVGSLKVEVDANEQEKVSIQLLEEFNCLPTFIPSDLYKQFHDGFCKQQLWPLFHYMLPMYPGNHRFDRSQWQAYVSANKIFANKVMEVLNPEDDYVWVHDYHLMVLPTFLRKRCTRVRLGFFLHSPFPSSEIYKTLPVRGEILKALLNADLIGFHTFDYARHFLSCCRRMLGLEHESKRGYIGLEYFGRTIFIKILPAGIHMGRLRSALDHPSSSDKVREIHQRFKGKKLILGVDDMDIFKGVSLKFLAVEQLLQQYPELQGELILIQILNPPNSADKDVEDAKEETYITAKRINERFGLEDYEPIIIIDRHVPFYEKAAYYALADCCIVNAVRDGLNLVPYKYTVCRQGSSKIDEALEIASDSPRVSALVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAVTMPDGEKQLRHEKHFRYVSSHDVAYWARSFEQDLVFSCKDQHRNRCWGIGFGLNFRILSLSPNFRRLSIDHIVPAYKRSSCRAIFLDYDGTVVPQASIVKPPSPEVISVLNNLCSDLNNTVFIVSGRGKPSLSEWFDQWGKHTSWQMSHADTDFAWKRIAEPVLRSYMEATDGSSVESKESALVWHYRDADPDFGSWQAMELLDHLENVLANEPVVVKKGQHIIEVKPQGITKGLAVQEVLSTLTKKGKSPDFVLCIGDDRSDEDMFESILTKAYNATSSSAPQIFACTVGQKPSKARYYLDDTVDVMNLLEGLAAVSGPKSRYSTEAPFEKREVCFEHID 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00194 933 SUPERFAMILY HAD-like 674 907 IPR036412 -
Pste2g00194 933 Pfam Trehalose-phosphatase 677 895 IPR003337 GO:0003824|GO:0005992
Pste2g00194 933 Gene3D Glycogen Phosphorylase B; 395 611 - -
Pste2g00194 933 NCBIfam trehalose-phosphatase 674 906 IPR003337 GO:0003824|GO:0005992
Pste2g00194 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 143 626 - -
Pste2g00194 933 FunFam Alpha,alpha-trehalose-phosphate synthase 396 611 - -
Pste2g00194 933 CDD HAD_TPP 675 901 - -
Pste2g00194 933 Gene3D Glycogen Phosphorylase B; 134 394 - -
Pste2g00194 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 136 394 - -
Pste2g00194 933 NCBIfam HAD-IIB family hydrolase 675 861 IPR006379 -
Pste2g00194 933 FunFam Trehalose-6-phosphate synthase 10 789 917 - -
Pste2g00194 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 112 907 IPR001830 GO:0003824|GO:0005992
Pste2g00194 933 Gene3D - 767 920 IPR023214 -
Pste2g00194 933 Gene3D - 673 754 IPR023214 -
Pste2g00194 933 FunFam Trehalose-6-phosphate synthase 2 742 821 - -
Pste2g00194 933 Pfam Glycosyltransferase family 20 143 626 IPR001830 GO:0003824|GO:0005992
Pste2g00194 933 CDD GT20_TPS 143 626 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00194 Pste-Chr2 1019317 1025472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00194 85 932 Trehalose Biosynthesis Gene Families AT1G23870 64.088 0.0 1174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00706 7 6454391 6459616 Pste2g00194 2 1019317 1025472 ECH
Pste2g00194 2 1019317 1025472 Pste2g00194 2 1019317 1025472 ECH
Pste6g02285 6 10953791 10970542 Pste2g00194 2 1019317 1025472 PCT