Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00190 CAATGGATGGGAACAAGGACGACGCGTTGAAATGTTTGAGAATCGGTAAAGAGGCTTTAGAAAGCGGCGATCGGTCACGCGCTTTGAAGTTCGTGACGAAGGCGCGTCGCCTCGATCCCAGCCTCGCCGTCGATGATCTTTTGTCGGCGATAGAGGCTGAGGCAGGGGATCAGCGCCCAGCCGCCGAGGCGGCGGAGCCTACAAATTCCCCTGATCAGCCTTCTATCCGACGAAGGGCCACCGGGGCCACCGCCGCCACTAGGGCGGCCTCGGGGTCCTCGTCCTCTTCGGTCTCATACACCGAAGAGCAAATTTCAATTATAAGAGAAATTAAGAGAAAGAAAAACTTTTATGAGATATTAGGGTTGGAGAAAACTTGCACTGTTGAGGATGTGAGGAAATCATATAGGAAACTGTCTCTAAAGGTTCACCCTGATAAGAATAAGGCCCCTGGCGCTGAGGAGGCGTTCAAGGCGGTGTCGAAGGCGTTTCAGTGTCTCAGTAATGATGAGAGTCGGAGGAAGTATGATGTCTCGGGTGAGGATGAAGCGATTTATGAGCAGCGTGCTGCAAGGCCGGCTGCGCGGGGCTATAATGGTTACTATGAGGCTGATGTTGATGCTGAGGAAATATTCAGGAACTTCTTCTTTGGAGGAATGGCCCCTGCTGCAAATTTTGGAGGGTTCAGCTTTGGACCAGGTGGATTCAATGGTTTCCACGGTCATAGGCCTGCTGAACAGGGTTCTGGTGGTTTTAATGTTCGTGCTTTGATTCAGTTGCTGCCTGTGTTGCTTATTTTCCTTCTGAACTTTTTGCCTTCGTCGGATCCTTTGTATTCGCTTTCCAAGAGCTATCCTTATGAATATCGGTTTACCACACCTAAGGATGTTAACTACTATGTCAAGTCCACAAAGTTTGCTCAGGAGTATCCGCCTGAGAGCGAGGAACGATCAGCAATTGAACAAAGAGTGGAGAGGGAGTATTTCAGCATTCTTCGCCAGAATTGTCATTTCGAGTTGCAGCGTCGCCAATGGGGTTATATCCGGGAAACACCTCACTGTGATATGCTGCGGAAGTATGAACTGATGCAGAAGCTTTTACCTGCTTGTGATATTATAGAATGTACAATTTATTTTTCACACTTATTAGTGAAGCAAGTTCATAATAAGCCAGCTGTTTTGTTGGGA 1187 0.4836 MDGNKDDALKCLRIGKEALESGDRSRALKFVTKARRLDPSLAVDDLLSAIEAEAGDQRPAAEAAEPTNSPDQPSIRRRATGATAATRAASGSSSSSVSYTEEQISIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRRKYDVSGEDEAIYEQRAARPAARGYNGYYEADVDAEEIFRNFFFGGMAPAANFGGFSFGPGGFNGFHGHRPAEQGSGGFNVRALIQLLPVLLIFLLNFLPSSDPLYSLSKSYPYEYRFTTPKDVNYYVKSTKFAQEYPPESEERSAIEQRVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKYELMQKLLPACDIIECTIYFSHLLVKQVHNKPAVLLG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00190 395 CDD DnaJ 115 168 IPR001623 -
Pste2g00190 395 Pfam DnaJ domain 115 176 IPR001623 -
Pste2g00190 395 Pfam Domain of unknown function (DUF1977) 272 346 IPR015399 -
Pste2g00190 395 SUPERFAMILY Chaperone J-domain 74 175 IPR036869 -
Pste2g00190 395 PRINTS DnaJ domain signature 117 135 IPR001623 -
Pste2g00190 395 PRINTS DnaJ domain signature 135 150 IPR001623 -
Pste2g00190 395 PRINTS DnaJ domain signature 151 171 IPR001623 -
Pste2g00190 395 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Pste2g00190 395 FunFam Chaperone protein dnaJ 49 111 226 - -
Pste2g00190 395 Gene3D DnaJ domain 111 225 IPR036869 -
Pste2g00190 395 ProSiteProfiles dnaJ domain profile. 115 179 IPR001623 -
Pste2g00190 395 PANTHER AT29763P-RELATED 1 358 - -
Pste2g00190 395 SMART dnaj_3 114 171 IPR001623 -
Pste2g00190 395 MobiDBLite consensus disorder prediction 54 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00190 Pste-Chr2 952704 953950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00190 110 176 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.437 4.42e-09 55.8