Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00166 ATGGCTACTCCTCTTGAGCAGCACAATGCAACCTTGCCTGTTCATTTCTTCAAGATTATTCTTAACACTAATGTTGAAAGGATTACTCTAGAGTACTCATGCATGGAGTTTTTGCAGAAAATACCTAATATGTTTGCAAAGCAATATGGTGATTGTTTGTCAGATCCAGTGTGTCTCAGACCTCCGGATTTGAAGGAATTTAAAGTGCATTGGACAAGAAGAGAGAATGGTGACGTTTGGTTGGAAAAGGGTTGGAAAGAGTTTGTTGAAAATTATTCCTTGAAAAATGGACACTTTGTGGTGTTTAAGTATGAAGGAGCTTCCATGATTGATGTACTCATACTCGATCGAAGTGCACTAGAAATAGATTACTCTTCAGATTATTATGTTGAAGAAATGAGTAGTGATGAATCAGATAAGATCTTAGAGGAAAATCCAAGGGAGAGGCAAAGTGGTAGACATATGATTGTGAAAAGAAACCCCAAATATCACAAGTTGGATTCAGCTGGGGGTGTTCAATCTCGCCAAGGGAAAAAGCTTAAAAAAAATAGGAAGCACCGCCAAGAAGCTCAAATAACATGTTTGAATATGCCAAAAACACTTAAAGCTCAGCAATTAACAAGAAAATTTGAATCAGAGAATCCTTTTTTCACCCTCATCATAAAGAAGTCTCAGTTGGAAGAAAATGCTAAGAAATGGGTGCCTAGGTTCTTAGATATTGAAAGCAACAAGAAGAGTGTGATGTTGGAGTATGGCACACGGATCTGGTGTGTGCAAATGATCCGTGTTCGTGGTAAGAACTATGATTTGTTCTCTTCTGGATGGTCTGTGTTTGCCAAAGAGAGTAAATTGCAAGATGGTGATATTTGTATCTTTGAGTTGACTGATCCTAGTTCTCCATTGCTTGAGGTTACAAAAGTTTGGCCCATTTAGTTACTTGATGTTTTCAGGATTTAACTGTCTTTTATGTTTTGAAGATCTGTGATTTTATTGTTTGGGTATGGTTAATTTGGA 1014 0.3728 MATPLEQHNATLPVHFFKIILNTNVERITLEYSCMEFLQKIPNMFAKQYGDCLSDPVCLRPPDLKEFKVHWTRRENGDVWLEKGWKEFVENYSLKNGHFVVFKYEGASMIDVLILDRSALEIDYSSDYYVEEMSSDESDKILEENPRERQSGRHMIVKRNPKYHKLDSAGGVQSRQGKKLKKNRKHRQEAQITCLNMPKTLKAQQLTRKFESENPFFTLIIKKSQLEENAKKWVPRFLDIESNKKSVMLEYGTRIWCVQMIRVRGKNYDLFSSGWSVFAKESKLQDGDICIFELTDPSSPLLEVTKVWPI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00166 310 PANTHER B3 DOMAIN-CONTAINING 13 295 - -
Pste2g00166 310 SUPERFAMILY DNA-binding pseudobarrel domain 210 299 IPR015300 -
Pste2g00166 310 SUPERFAMILY DNA-binding pseudobarrel domain 16 118 IPR015300 -
Pste2g00166 310 CDD B3_DNA 215 299 IPR003340 GO:0003677
Pste2g00166 310 Pfam B3 DNA binding domain 40 107 IPR003340 GO:0003677
Pste2g00166 310 Pfam B3 DNA binding domain 221 298 IPR003340 GO:0003677
Pste2g00166 310 ProSiteProfiles B3 DNA-binding domain profile. 24 118 IPR003340 GO:0003677
Pste2g00166 310 ProSiteProfiles B3 DNA-binding domain profile. 217 308 IPR003340 GO:0003677
Pste2g00166 310 SMART B3_2 16 118 IPR003340 GO:0003677
Pste2g00166 310 SMART B3_2 216 308 IPR003340 GO:0003677
Pste2g00166 310 MobiDBLite consensus disorder prediction 165 184 - -
Pste2g00166 310 Gene3D - 197 308 IPR015300 -
Pste2g00166 310 Gene3D - 7 119 IPR015300 -
Pste2g00166 310 CDD B3_DNA 15 116 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00166 12 305 B3 DNA Binding Superfamily AT3G18990 22.319 8.80e-19 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste2g00166 B3 5.8e-09 CL0405