LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g00136	ATGGAATCATGGGGTGTTCAGCATCGAGCCATGTACATTTGTCGGCATGAGGAAGATGGAACTCCTTCTGATACTTCTAGAGGAGAGGAATCAAATGATGAAGAAGAAAAAATCATTAAAACTGAACCTGTCTTTGTGCCAGAGATTAAGAAAAGGAAACGCCTAAGCCTTAGTCAGCTTAAAGAGGTGAAAGAGGAGTCATGTGGGAAGCAAAACAGTATCAAGCTTAAGAAAAAGAAACATGAAAGTAGGGATAGATGGTCATCAGAGAGGTATCAGTTGGCTGAGCAAAACATGTGGGAGGTGCTTAAGGCTGAAGGAGCAACATTTGAAAACCCAATAACCCGACCTGCACTAAGATTGGCTGCCCGCAAACACATTGGGGATACTGGACTTTTAGACCACTTACTGAAGCATATTGATGGTAAAGTGGCACCTGGAGGTACTGAGCGATTCCGAAGATGGTTTAATACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGACTTGGACAAGGTGCGCCAGGAGGCAGGGGTGCAGGACCCTTACTGGATACCACCATCTACATATAGGGCAGCCAGTGCCCCCTCTCAGAATATTGATTCTTCTGGTGAAATAGAAAAGCTTAAAATAGAATTGGCTCAAATGAAGAAATATATGCATGAGCTCATTACCAAGAAGGAAGAGAAAAGTGATATTAATATGATGGAGGAGACACACAAGGAATTTGTGAAGTGGAAAACTGTGACTGACCATCGCCTTACTGAAATCATGACTTCTTTGAAGGGTCTGCAGGGAAAGTATGGTGAATTGATGATTTGGAAAACTAAAGTTGAGCAACAACTTGAAGAAGTAACTAACAAATTGAATGATCTTCAAGCATCTAGGGAGTGCACCACCTTTAGTCCTTCAGAAAGGTGGAAAGACTGGATAGAAAGCACCAACCTAGACAATATTCAGGAAGATGCATTTGCAACTTGGATTGGGAATCCAGAGCTACTTAATGTTCCAGGAGAGGTTTTACTTGCAGATCCCAACACAGTCATACCTACACAGCCACTAAATGAAGAACTGAATAACAAGAGTAGTGATGTGCTGGAATTGGTACCGAGTAAGCTTGAAGATCAACCTAATGTGACCCCCGATTCTTCTACAACTGTTAATTCGAAGTCAGATGTTGACAACTCATTGATTATGTTTCAGGAGATGTTTATGGATTTATACAAATGGAAAGAAAAAATGGAACAGCAGCTGATGGAGGTATCAAATACTGTATATGGTATGCTGGCAATGAAGTAG	1302	0.4147	MESWGVQHRAMYICRHEEDGTPSDTSRGEESNDEEEKIIKTEPVFVPEIKKRKRLSLSQLKEVKEESCGKQNSIKLKKKKHESRDRWSSERYQLAEQNMWEVLKAEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPYWIPPSTYRAASAPSQNIDSSGEIEKLKIELAQMKKYMHELITKKEEKSDINMMEETHKEFVKWKTVTDHRLTEIMTSLKGLQGKYGELMIWKTKVEQQLEEVTNKLNDLQASRECTTFSPSERWKDWIESTNLDNIQEDAFATWIGNPELLNVPGEVLLADPNTVIPTQPLNEELNNKSSDVLELVPSKLEDQPNVTPDSSTTVNSKSDVDNSLIMFQEMFMDLYKWKEKMEQQLMEVSNTVYGMLAMK	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g00136	433	Coils	Coil	276	296	-	-
	Pste2g00136	433	PANTHER	PROTEIN DYAD	1	431	IPR044221	GO:0007131\|GO:0051177\|GO:0051321
	Pste2g00136	433	MobiDBLite	consensus disorder prediction	61	82	-	-
	Pste2g00136	433	MobiDBLite	consensus disorder prediction	12	41	-	-
	Pste2g00136	433	Coils	Coil	207	227	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g00136	Pste-Chr2	554471	556581	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g00136	86	167	PHD Transcription Factor Family	AT5G22260	40.964	3.27e-06	47.8