Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00125 GTACTTCTCAATTAACACTCTCTATTCAAAACCACTCACTTTTTCCTTCAGATTTCTCTTCTCTCTCTACAGTCATAACAAAACCATTATGGTGCAAACAAGAAAGTTCAGAGGTGTTCGGCAGCGCCATTGGGGTTCATGGGTTTCAGAAATTCGTCACCCACTTCTCAAGAGGAGGGTGTGGCTAGGCACATTCGAAACAGCAGAAGAAGCAGCACGAGCATATGACCAAGCCGCCATACTCATGAGTGGTCGAAACGCAAAGACCAACTTCCCCACAGTCGAAACCCTAGAGGGGGCCCCCAAAACCCTAGACCCCTCAGAGGAGTCCTCATCCACGGCCTCAAAGGAGCTCGAGGAGATTCTCCATGCCAAGCTCCGCAAATGTGGGAAGCTCCCCTCCCCTTCCATGACCTGCCTTAGGCTCGACCCAGAAAACTCGCATATCGGTGTGTGGCAAAAGCGCGCCGGCCACGGCTCTGACTCCCACTGGGTCATGATGGTTCCCATGGAGAAGAAGAGCAGTAATAATAATGGTGATGGTGGTGATGATAATAGTAATATATCTTCGAGTTCGAAGAGGGAAGAGACACAACAAGTGGGTAAAGAGATGGATGAGGAAGAAAGGATTGCACTGCAAATGATAGAAGAGCTTCTCAGCCGGAACTGCCCCACTAGCCCTTCGTTTAATAATAATAACAACATATATTAAGGACAGTGTTGCTTTGCTTCAAGGTTATTTTCAGCATTAGCCAGACTCACAGTCTCTTTATAATTAATCTAAGAGTAAATTCCTCATACTTGTTTAAGGCTTGTTCTTAT 822 0.4647 MVQTRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPTVETLEGAPKTLDPSEESSSTASKELEEILHAKLRKCGKLPSPSMTCLRLDPENSHIGVWQKRAGHGSDSHWVMMVPMEKKSSNNNGDGGDDNSNISSSSKREETQQVGKEMDEEERIALQMIEELLSRNCPTSPSFNNNNNIY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00125 207 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Pste2g00125 207 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Pste2g00125 207 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Pste2g00125 207 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Pste2g00125 207 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Pste2g00125 207 MobiDBLite consensus disorder prediction 142 180 - -
Pste2g00125 207 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Pste2g00125 207 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 5 162 - -
Pste2g00125 207 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Pste2g00125 207 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Pste2g00125 207 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Pste2g00125 207 MobiDBLite consensus disorder prediction 142 166 - -
Pste2g00125 207 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00125 Pste-Chr2 498322 501716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00125 1 193 AP2-EREBP Transcription Factor Family AT1G15360 63.317 5.33e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g00125 AP2 1e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00125 2 498322 501716 Pste2g01754 2 18039113 18039724 ECH
Pste2g00125 2 498322 501716 Pste2g00125 2 498322 501716 ECH
Pste6g02960 6 17400308 17402605 Pste2g00125 2 498322 501716 PCT