Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00105 GGGAGAGCTTCTCAATTTTCTTCTTCTGCATCCCCTCTTGCCTCTTTACCTTCTCCTCTTCTTTCTTTCATACTTTCTTCTTTTGGCAACGAAATTTGTGAGACATGTCAAGCTGCAACATCGATGTTGCTCCTGAGCAAGTCTGCTATATCCCGTGCAACTTTTGTCACATTGTTCTTGCGGTGAGTGTTCCATGCAATAACCTGTTTGATATTGTGACCGTTCGATGTGGACACTGCACCAATCTATGGTCCGTGAACATGGCCGCAGCGTTTCAGTCATTGTCATGGCAAGATGTTCAGGCATCTGGTTACTCTAATCCGGAGTATAGAATTGACACAGGCTCCACTTCAAGATACAATAGGATACAAATGCGTGCACCCACCACTCATGTAACTGAGGAAAGAGTTGTCAACAGGCCTCCTGAGAAGAAGCAGCGTGTACCTTCTGCTTATAATCAATTCATCAAGGAAGAGATTCAAAGGATCAAGGCCAATAATCCTGATATCAGTCACAGGGAAGCTTTCAGTACAGCTGCGAAAAATGAATCTGGAAAGCATCTGATATCAAAGGACTACGCTATTGAACATATAATTGCTATTTCCATATCTCAAGACTTCTGTTTAATTTGAGTTTGCCATAGCACGATGATTTTATTTTATTGTGTTTATTAGTTAGCTCTTTTACAGCATCAAAATAACTTGTGACTAGTTAAATTACGGCTTTTTACCCAAGTTGAAGAAT 744 0.4073 MSSCNIDVAPEQVCYIPCNFCHIVLAVSVPCNNLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQASGYSNPEYRIDTGSTSRYNRIQMRAPTTHVTEERVVNRPPEKKQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNESGKHLISKDYAIEHIIAISISQDFCLI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00105 175 Gene3D High mobility group box domain 103 156 IPR036910 -
Pste2g00105 175 CDD HMG-box_SF 112 146 - -
Pste2g00105 175 Pfam YABBY protein 9 147 IPR006780 GO:0007275
Pste2g00105 175 PANTHER PROTEIN YABBY 6-RELATED 1 148 IPR006780 GO:0007275
Pste2g00105 175 SUPERFAMILY HMG-box 102 144 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00105 Pste-Chr2 402353 409244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00105 5 147 C2C2-YABBY Transcription Factor Family AT2G26580 73.611 6.03e-73 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pste2g00105 YABBY 8.7e-57 CL0114