Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00097 CCCTTTTCTCACCAATTACTTTCCAGGTTCCATTCCCCCACACCCACACAACATCAATATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACCCCCTCTACCATGGGTAGATCTCCCTGTTGTGAAAAAGAACACACAAACAAAGGAGCTTGGACCAAAGAAGAAGACGAACGCCTCATCAACTACATCAAGCTCCACGGTGAAGGCTGTTGGAGATCCCTTCCCAAAGCTGCTGGCTTGCTCAGATGTGGCAAGAGTTGCAGACTCAGGTGGATAAATTACCTCAGACCTGATCTCAAGAGAGGCAACTTCACCGAAGACGAAGACGAACTCATCATAAACCTCCACAGCTTACTTGGCAACAAATGGTCTCTAATAGCTGCACGCCGCGGAATCGACCCGCAAACCCATCGTCCTCTTAACGCCTCCGCCGCTCCGGCAACCACCGCCACCACCGCCACAGCCACTTCCACGGCAGTAGCTCCGCCGCTTCTCACCTCAACCATCAACAAAAACAACGACAACATTAGCGCCACCACCACCTCCAACAACAACGGTTTTCAGTTGGTCACTAACGGTGCTGCTTTTTCTAACACACAGAAGATTGTTGGAACGGACTTGGTGGCTGAAGATTCTAACAGCAGCAGCGGTGTTACAACAGAAGAAGCTTTTCCGAATCTTCAACTCAACTTGGACCTTTCCATGGCCCTTCCCTCTCACCAACCCCAACAAGTTTCTTCAGAAAAGTTGAAACCTTCATCACAACCGCAAGAGCATGATCAAAAGCCGCATGTTTTGTACCAGTGGTATGGGAACATCACTGCCCCACAAGGTGTGTGTCTGTGTTACAATCTAGGGCTTCAGACCAACCAAGCTTGTTATTGCAAACCCATTCCTACTTCTACTACTACTACGGTTGCTACTGCTGCCACCGATACTAATCTATATAGATTTTACAGACCCATGAATATT 990 0.4859 PFSHQLLSRFHSPTPTQHQYTLSLSLSLSLSLSLSHTPSTMGRSPCCEKEHTNKGAWTKEEDERLINYIKLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEDEDELIINLHSLLGNKWSLIAARRGIDPQTHRPLNASAAPATTATTATATSTAVAPPLLTSTINKNNDNISATTTSNNNGFQLVTNGAAFSNTQKIVGTDLVAEDSNSSSGVTTEEAFPNLQLNLDLSMALPSHQPQQVSSEKLKPSSQPQEHDQKPHVLYQWYGNITAPQGVCLCYNLGLQTNQACYCKPIPTSTTTTVATAATDTNLYRFYRPMNI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00097 330 Pfam Myb-like DNA-binding domain 107 137 IPR001005 -
Pste2g00097 330 Pfam Myb-like DNA-binding domain 54 101 IPR001005 -
Pste2g00097 330 MobiDBLite consensus disorder prediction 147 164 - -
Pste2g00097 330 FunFam MYB-related transcription factor 53 106 - -
Pste2g00097 330 CDD SANT 56 101 IPR001005 -
Pste2g00097 330 Gene3D - 54 106 - -
Pste2g00097 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 135 IPR017930 -
Pste2g00097 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 105 IPR017930 -
Pste2g00097 330 MobiDBLite consensus disorder prediction 245 267 - -
Pste2g00097 330 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 41 153 - -
Pste2g00097 330 ProSiteProfiles Myb-like domain profile. 49 101 IPR001005 -
Pste2g00097 330 SMART sant 106 159 IPR001005 -
Pste2g00097 330 SMART sant 53 103 IPR001005 -
Pste2g00097 330 ProSiteProfiles Myb-like domain profile. 102 136 IPR001005 -
Pste2g00097 330 Gene3D - 109 176 - -
Pste2g00097 330 MobiDBLite consensus disorder prediction 143 164 - -
Pste2g00097 330 SUPERFAMILY Homeodomain-like 55 132 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00097 Pste-Chr2 363639 364931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00097 41 324 MYB Transcription Factor Family AT4G38620 42.020 4.30e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g00097 Myb_DNA-binding 5e-15 CL0123