Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00084 TCCAAACAGGCCCTTAGCGTGTTGAGCTTTACGGTTGAATTGAGGTCGTGGTGGAAACGCAGAGGGCGATGGGAGACGGAAGTGGCAGCAACCGTTCGAACAGCAACAAACCGGAGTGGCTGCAACAGTATGATCTGATTGGGAAAATTGGCGAAGGCACCTACGGTCTCGTCTTCCTCGCTCGCATCAAGTCTCAAACCAATCGCGGAAAATCCATCGCCATAAAAAAATTCAAGCAATCTAAGGATGGCGACGGTGTTTCTCCCACCGCCATACGTGAAATCATGTTACTCAGGGAGATAACGCACGAGAATGTTGTGAAGCTTGTGAATGTTCACATTAATCACACGGACATGTCTCTTTATCTAGCTTTTGATTATGCAGAACACGACCTCTATGAAATAATAAGACATCACAGGGACAAAGTGAACCAACCCATTAACCAGTATACTGTTAAATCGCTACTCTGGCAGTTGCTTAATGGACTAAACTATCTACACAGCAATTGGATAATACATCGGGACTTAAAACCATCCAATATATTGGTTATGGGTGAAGGGGAGGAACATGGATTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAAGCACCTTTGAAGCCATTATCTGATAATGGGGTTGTTGTAACTATTTGGTATCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGCTGTTGGTGCAGAAGTCAAAGCTACACCAAATCCTTTCCAGCTTGACCAACTTGACAAGATATTCAAGGTTTTAGGTAATTTATTTTCTTACAGTTTTTCTTTCTCCCTTCTGGGGTTGTTCATTCTGTTGATGATATCCAGACCTACATCAGTGGACATTGTTACTGTGCCAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAATCTTCCCCATTGGCAACAAGATACACAGCATATACAAGGACACAAATATGAGAACGCAAACCTCTACAGTGTTGTACACCTATCTCCGAAAAGTCCTGCATATGACCTCTTGTCAAAGATGCTGGAATATGATCCACGAAAGCGTATAACAGCAGTCCAAGCTTTGGAGCATGATGACTATATCATTAGCTCATCAATCAATTATAGACCTTTAGTATTCCGTGTCATTGTTCATGGAGGTAGTCTGTTGATGGGAAGACACCTTTATTGTCACAATTTGTGCGTATTTCAAAATCGAACCCCAACCTGGGCGGAAGTAGGGCCTCTTTCTTCCTTCTTCCTTTTGGTATTTTGGTTTGGTCTTTTTCCTCAAGTTTCTTTGAATAAAACCTTTATCTTGTACTATTGTGCACTTGTACCCTGTCAACCTGGAGAGACATTTGTGAATTATCCCACTCGTCCAGTGGATACAACAACAGATTTTGAAGGGACTACCAGCATGCAACCTTCACAGCCGGTTTCGTCTGGAGCTGCAGTTTCTGGCAGCATGGCTGGTGGTCATGTATCAAATAGATCTGTTCCTCGGCCAATGAATGTTGGTGGCATGCAGAGAATACCTCATCAGACAATGCAAGCTTATAATGTCACTTCTCAGGCAGGGATTAGTGGTGGAATGAATCCTGGTGGCATCCCAATGCAACGGGGTGTTCCACAGCAACAGTTGAGAAGAAAAGACCAAATGAGCATGCCTGGCTATCCTCCACAGCAGAAATCAAGACGTATATAAGGTTGTGTTGGTAGAGATCAAGTGAAGATAGATTAAGCCTTTGGGATCAACACTAGGGAACGTGAGCTCGTTCAGGAGAATTCATGACTTCCTAAGTTCCTTGGTTTTCCTCCATGCTTCGGACCATATTTTTTTTTTCCACTCAAGGGTTTATTGTTATGAAATCTCCTGCTGTAATATACTAATGGAGCCCTTGGAAGGGAATACACATGGGAAATGGGTGAGCTCATGGAGGCTGGAGGGACATGTATATATTTAGGTATACAACTTCCTTGTATTTTCGTAGCTGTTAGGCCAGATAAAATGTAGGTTTTTGCCTAGATTGAATTGAACTTTTAGTGACTAAACTGTTAATATGTAGCTATGTTGTAGAATAATGCCTTAATTGAAGGAAGTTACTTTGACTTTTATATGTAAGTCAAGGTTCCATATCTACATCTAATCTCCTTATACCTCATAAAGATCTTGC 2175 0.4202 MGDGSGSNRSNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHTDMSLYLAFDYAEHDLYEIIRHHRDKVNQPINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGFVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVGAEVKATPNPFQLDQLDKIFKVLGNLFSYSFSFSLLGLFILLMISRPTSVDIVTVPGHPTLEKWPSLANLPHWQQDTQHIQGHKYENANLYSVVHLSPKSPAYDLLSKMLEYDPRKRITAVQALEHDDYIISSSINYRPLVFRVIVHGGSLLMGRHLYCHNLCVFQNRTPTWAEVGPLSSFFLLVFWFGLFPQVSLNKTFILYYCALVPCQPGETFVNYPTRPVDTTTDFEGTTSMQPSQPVSSGAAVSGSMAGGHVSNRSVPRPMNVGGMQRIPHQTMQAYNVTSQAGISGGMNPGGIPMQRGVPQQQLRRKDQMSMPGYPPQQKSRRI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00084 545 MobiDBLite consensus disorder prediction 502 545 - -
Pste2g00084 545 Coils Coil 545 545 - -
Pste2g00084 545 ProSiteProfiles Protein kinase domain profile. 21 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00084 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pste2g00084 545 SUPERFAMILY Protein kinase-like (PK-like) 16 342 IPR011009 -
Pste2g00084 545 PANTHER CELL DIVISION PROTEIN KINASE 19 342 - -
Pste2g00084 545 Gene3D Transferase(Phosphotransferase) domain 1 106 348 - -
Pste2g00084 545 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Pste2g00084 545 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Pste2g00084 545 Pfam Protein kinase domain 21 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00084 545 MobiDBLite consensus disorder prediction 447 480 - -
Pste2g00084 545 FunFam Cyclin-dependent kinase e-1 9 104 - -
Pste2g00084 545 SMART serkin_6 21 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g00084 545 MobiDBLite consensus disorder prediction 447 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00084 Pste-Chr2 300284 307594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00084 421 545 Core Cell Cycle Gene Families AT5G63610 54.478 4.63e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Pste2g00084 Pkinase 5.7e-44 CL0016