Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00062 GGACAATGTGGCAAGAAAGAGGAAGGAGAACAAGGCTATAAGGGAGACTCGTTCGCTCGGAATATTCGAAAACTAACTCAATACCCCTCTCCTTCTTCCTGCGCCTCCAACGGTCTTTGTAAGATCCTCGCTTTCGTACTCTCTTCTTACTTCCCAACTCTCTTTCTCTACTTCTTTATACTTCTTCCTATTGAACTTCAACTCTAACTCTGTCGTTAATTTCCTTCTGGCGGGAACTCAGGTTTTTCGCCGTCTTCCTTCATTCTCGCCATTTCTTTTCCCTCCTTTCTCGTTAACGTTCATGTGACGCCGTCCTTTCCTCCAATGTTCCTCTCTTCTTTTTTCTTGTCGGCACTTTCCTACCCGCTTCCTTTGCGTGTTTGTTACCCAAACTTCATCTGTTATGTAATCGCGAGTATGCCACATTCTAGGGTTTTCCCCCTTTTTAGCCCTTGCGTCCCTCGTTATCGCTTCCGATCCTTCAATGCTCGCCGTTTCGATTTTCAATTTATCTACACTTATTCAAATTTAATATTTAATGAAGACTAAACTATGTTGCAGTTTTGTTCATGCACACTGGACTGCTTTTAATCATTTTATTTTATTTTAGCTTAAAACTGGATTTTTTTAATTATTTTTTTCTTAAATATCATGCAACTTTAGCTTACTTAAGCTTCTTTTTAGATAGGTTCCAATGATGTTGCAAGTGATTACTATATTGCAGTTTATTGTATTGCTGAAAGAGTTATGTTCTGCTGAATTCTCAGTGTAGGGTTTCTCGGATTGACAGGAACTGAGGCATTGTCCCTATGCCGCTTTTGAAGAGAAAGCCTTTTGCTTTGGCAGAGCCACCTAATGATTTGCAGCCACATGAGACTGTTTATCAAATTCGATTTACAAAAGAAATATTTCAAGATTATGACGTTTTTTTGAACCGTTTAAATCAATACCGTCAAAGGGTTTGGACATGCAAAATGACTGGAAAATCTGGCTTGACTTATGAAGAGGCTCTTTTGTCAGAAAAACGTGCTACTGAGAAAGTTCAGCAGATTCCGGAAGAATTAATGGCACCTGCTCTAAGGATTATTCAGTACAGTGTGCTCCCTTTGAAGGATCTTGCTGATACTATTGCTGAGAAGTTGCAGGAGCAGTTTTTTGTGGGCACTCAATTGTATGGAAAGAAGAATAACAAAGTATGTCCATGTAAAATATTGGAAGTGATGCAGGAAGATGCTGAAAATGTCCGTTATGTAGTAGCTTGGCTTGACAAAAACAATAATGTTTTTGAAAGAGCAGAAGTCAGCTCTCAAGATTTGGTACAAAAAAAGCCACCTTTCAGTAGAAATATTTTGAAGTCTTTTATTCGCGAATCTACATATCGAAATGCACCTTGGGTTTTACATGATAAACTGGCAAAAAAACATGGAATCTCAACTAACATTCCAGAGGAGTTAAGAGGAAAGGCTTTCTTCAACAATGGGCTTGTGGTCTGCTCCAAAAAAAGAAAAAATGAGGAAAAGTCAATCAAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCTGTTTTCAGTAGTCGTCCTTCTCTGTCCCGAGACTTTAGTGTTCCAGTTTATTGTGTAGGGAATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGCTAAACTGTTACGGTTGTGGCCTTACTCTCTCAAAGATTTTGAAAATGCAATCAGCCACAAGGATTGCAATGTAGTTCTCCTAGTGGAATCTCATGTAGTACTCTTTCGAGTGCTCATGAAATGTGATGATGAATACTCTGCAGCTGTTCAGGAAAAAATACAGAAGAAGGTTAGCATCACTCAAATATATTCCTTATTTTAG 1874 0.3842 MPLLKRKPFALAEPPNDLQPHETVYQIRFTKEIFQDYDVFLNRLNQYRQRVWTCKMTGKSGLTYEEALLSEKRATEKVQQIPEELMAPALRIIQYSVLPLKDLADTIAEKLQEQFFVGTQLYGKKNNKVCPCKILEVMQEDAENVRYVVAWLDKNNNVFERAEVSSQDLVQKKPPFSRNILKSFIRESTYRNAPWVLHDKLAKKHGISTNIPEELRGKAFFNNGLVVCSKKRKNEEKSIKYPIDDLLVKPSPDDPVFSSRPSLSRDFSVPVYCVGNLLMVWDFFMSFAKLLRLWPYSLKDFENAISHKDCNVVLLVESHVVLFRVLMKCDDEYSAAVQEKIQKKVSITQIYSLF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00062 354 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Pste2g00062 354 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 237 - -
Pste2g00062 354 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 23 120 IPR013136 -
Pste2g00062 354 SMART testlast3 271 332 IPR018501 -
Pste2g00062 354 ProSiteProfiles DDT domain profile. 271 332 IPR018501 -
Pste2g00062 354 Pfam DDT domain 273 327 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00062 Pste-Chr2 206285 209658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00062 273 328 Homeobox Transcription Factor Family AT1G28420 46.429 6.78e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pste2g00062 WAC_Acf1_DNA_bd 3.7e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00062 2 206285 209658 Pste2g00062 2 206285 209658 ECH
Pste3g01433 3 8865419 8871187 Pste2g00062 2 206285 209658 PCT