Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00041 GAGTCACTCACAAATCACAATTTTGAATGGCTGCAGAAATTTGTGGCGCCTCTCTATTCTTATTAGTTAAACCTCAGCTGCAACTGCAGCAACGACACCAGCAACACGTGTTCTTCCATGCTCAACGAGGAAGAACACGAAGAAGCACTACCAGATTCTACTCATCCAAATGCGTCCATGTTTCGCCGCAGCTTCGTGTGCCAAGTCGCGAGCACGGATTTCGAATCCGCCGCCAAAGCAGGCGAGGATCGTCTCTCTAAGGTGCCGGTGCCTAATATAAGGAACTTCTGCATCATTGCGCATATTGACCACGGGAAATCGGCGTTAGCGGATAAGTTGCTTCAGGTTTCGGGCACGGTGCACCAGCGAGAGATGAAGGATCAGTTTCTGGATAACATGGATTTGGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGATATGTCTATGAAAATGATGAAAATGAACCTTACTGCTTGAATCTAATAGACACTCCGGGTCACCTCTACTTCTCGTACGACGTTTCTCGATCACTTGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGGGTTGAAGCACAAACATTAGCTAATGTTTATTTGGCTTTGGACCTAGTTTTGAACAAAATAGATCTCCCAGGTGCAGAACCAGATCGAGTTATCAAGGAAATTGAAGAGGTTTTTGAATTGACTTGTATAGATTGTAGCAATGTGATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCAAGAATTCCCTCACCTGAAGATACATCTAAAAGACCACTGAGGGCTTTAATATTTGACAGGTACCCCTTTTTTTTCCCTAATGTTATCAGATTATTCCATTTGATGACATATGATATTATTGTAAAGTTTAAGGATCTAATTTCCATGTCTAAGGTTTATCTATACTTTAGCTACTATGATCCATACAGAGGTGTTATTGTATACTTTGGAGTTGTAGATGGGATTATAAAGAAAGGTGACAAAGTTTATTTTATGGCTAGTGGAAAGGTACAGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCGATCAACTACAAGTTGAAGAATTGTATGCTGGTGAGGAAGGTCCAACCTTTCTTCGATTTCCTCATGAACTTGGAAAGGAACTCCAGGAAGATCTTGGACTCTTAACTACTAACTACCAGACAGCTCTATCTTGGAGATGTCTCTGCCGCACTATATCTGTGGGATATCTATCTGCATCAATAAGAACAGTAGCTGATGCTAGAGTGGGCAACACTGTTACTCACTGTGGCAGAAAGGCTGATAATTCACTCCCTGGATATGAGGAAGCCACTCCTATGGTGTTCTGTGGCCTGTTTCCTGTTGATGCTGGCCATTTGAACCTGAGACCTCAAGTGCTATGGGATTTGGCTTTAGTGTGGGTTTCTGGGTCTTCTTCACATGGAAATTGTTCAGGTTTGAATTTGTTGCAGCATCTACTCTTTGGCTTTCATAGGAAATGCTTGAATGTTCTTATATGGAGAGACTTGAGAGAGAAATACAATTTGAGCCCGATAACAACTGCTCGAAGTGTTGTGTACAGAGTAAACGGTGTAAATGGTGATACTGTTGAATGCTCAAATCCTTCTTTACTTCGGGAGCCTGGAAAAAGGAAATCAATTGAGGAGCCATTTGTTAAGGACTACTACATTGGCTCACTTATGGAACTAGCACAAGAAAGAAGAGGGCAGTTCAAAGAAATGAATTTTATTGCTGAAAATAGGGCATCGATCACTTATGAATTCCCATTAGCAGAGATGGTTGGTGATTTCTTTGATCAGTTAAAGTACAAGGAAAGTAATTTAATTAAACTTGACATACGGATAAATGGTGATAGTGTTGAGCCACTGGCTACAATTGTGCATAATGATAAGGCATATTCTGTGGGAAGGGCTTTGACTCTTAAGTTGAAGGAGCTCATACCACGTCAAATGTTTAAAGTACCAATTCAGGCGTGCATAGGATCAAAAGTGATTGCTAGTGAAGCGATGTCTGCAATAAGGAAGGATGTGCTGCCAAATGCTACGGTCAGATAA 2118 0.4141 MLNEEEHEEALPDSTHPNASMFRRSFVCQVASTDFESAAKAGEDRLSKVPVPNIRNFCIIAHIDHGKSALADKLLQVSGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYVYENDENEPYCLNLIDTPGHLYFSYDVSRSLAACEGALLVVDASQGVEAQTLANVYLALDLVLNKIDLPGAEPDRVIKEIEEVFELTCIDCSNVILCSAKEGIGIIDILNAIVARIPSPEDTSKRPLRALIFDRYPFFFPNVIRLFHLMTYDIIVKFKDLISMSKVYLYFSYYDPYRGVIVYFGVVDGIIKKGDKVYFMASGKVQIILLMKLEFCLDQLQVEELYAGEEGPTFLRFPHELGKELQEDLGLLTTNYQTALSWRCLCRTISVGYLSASIRTVADARVGNTVTHCGRKADNSLPGYEEATPMVFCGLFPVDAGHLNLRPQVLWDLALVWVSGSSSHGNCSGLNLLQHLLFGFHRKCLNVLIWRDLREKYNLSPITTARSVVYRVNGVNGDTVECSNPSLLREPGKRKSIEEPFVKDYYIGSLMELAQERRGQFKEMNFIAENRASITYEFPLAEMVGDFFDQLKYKESNLIKLDIRINGDSVEPLATIVHNDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEAMSAIRKDVLPNATVR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00041 666 PANTHER TRANSLATION FACTOR GUF1-RELATED 279 341 IPR006297 GO:0005525
Pste2g00041 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 255 IPR027417 -
Pste2g00041 666 Gene3D - 594 662 IPR038363 -
Pste2g00041 666 Gene3D - 47 241 IPR027417 -
Pste2g00041 666 NCBIfam small GTP-binding protein domain 56 219 IPR005225 GO:0005525
Pste2g00041 666 Gene3D Translation factors 276 348 - -
Pste2g00041 666 Pfam Elongation factor Tu GTP binding domain 53 231 IPR000795 GO:0003924|GO:0005525
Pste2g00041 666 FunFam Translation factor GUF1, mitochondrial 589 663 - -
Pste2g00041 666 CDD LepA 55 232 - -
Pste2g00041 666 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 52 233 IPR000795 GO:0003924|GO:0005525
Pste2g00041 666 SUPERFAMILY Translation proteins 214 343 IPR009000 -
Pste2g00041 666 Pfam Elongation factor G C-terminus 534 584 IPR000640 -
Pste2g00041 666 SUPERFAMILY EF-G C-terminal domain-like 533 600 IPR035647 -
Pste2g00041 666 PRINTS GTP-binding elongation factor signature 99 107 IPR000795 GO:0003924|GO:0005525
Pste2g00041 666 PRINTS GTP-binding elongation factor signature 56 69 IPR000795 GO:0003924|GO:0005525
Pste2g00041 666 PRINTS GTP-binding elongation factor signature 142 153 IPR000795 GO:0003924|GO:0005525
Pste2g00041 666 PRINTS GTP-binding elongation factor signature 126 136 IPR000795 GO:0003924|GO:0005525
Pste2g00041 666 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 92 107 IPR031157 -
Pste2g00041 666 Gene3D - 499 593 - -
Pste2g00041 666 Pfam GTP-binding protein LepA C-terminus 597 661 IPR013842 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00041 Pste-Chr2 156162 169049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00041 53 180 Eukaryotic Initiation Factors Gene Family AT3G22980 43.066 6.58e-22 99.4