Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00030 CACTTCACCACCACGACTGGACTGCTGGAGTGCCATTTGGGCGCCCAAAGCGTTTCTAGATTTCAATATTTAGCTCTTTTCTCTCAATTCCTCTTTATATTTTCATTTTCTATTAAATTCTATTTTTCGCTTCTTTTAAAATCCACTCGCTCACATCACAAGTCACAACCACAGAGCAGAAAAGACTTGCACCAGAAGTTTCGAGAAATGTCTGGAAAAGCAAAGAGGAGAGACGATGACGCAGCTTCCGACGGCGACTCTGAAGCTCACGCGCCGCCTAAGAAGACCTTCAAGAAGGATTCCGATGAAGACTCCGACACTATTATTGTGTGCGAGATTTCGAAGTACAGGAGGGTTTCTGTGAGGAACTGGCAAGGCAAGATTATGGTTGACATTCGCGAGTTTTACACAAAAGATGGCAAGGAACTGCCTGGCAAGAAAGGTTATTCGGTTCTTTCAAATGTTCTTGAGTGTTCTTTTTTTATGGCTCTGTTAATTAGTTTTTGTTTATTGAGTGCCTTGCTTGTTGTTCAAGGATGTAGTTCGACTAATGAAGGATTTGTTATGTTCCGGTTGATGATGGCTGCAGTTTTTGCTCTCTTGCATATAAGTTATGCATTATTGATAAGCTTGTCAAACTATTGA 645 0.4124 MSGKAKRRDDDAASDGDSEAHAPPKKTFKKDSDEDSDTIIVCEISKYRRVSVRNWQGKIMVDIREFYTKDGKELPGKKGYSVLSNVLECSFFMALLISFCLLSALLVVQGCSSTNEGFVMFRLMMAAVFALLHISYALLISLSNY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00030 145 Gene3D Transcriptional Coactivator Pc4; Chain A 29 98 IPR009044 GO:0003677|GO:0006355
Pste2g00030 145 Pfam Transcriptional Coactivator p15 (PC4) 42 79 IPR003173 GO:0003677|GO:0006355
Pste2g00030 145 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 17 142 IPR045125 GO:0003713|GO:0060261
Pste2g00030 145 MobiDBLite consensus disorder prediction 1 35 - -
Pste2g00030 145 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 82 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00030 Pste-Chr2 125951 126689 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Pste2g00030 PC4 1.3e-16 CL0609