Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00017 GAGGGGTCCTGTGTCCATTGACAACGGTGCAATAGAGTCACTCACAAATCACAAGTTCAATGGCTGCAGAAATTTGTGGCGCTTCTCTATTCTTATCCGTTAAAACTCAGCTGCAACTGCAGCAACGACACAAGCAACACGTGTTCTTCCATGCTCAACGAGGCAGAACACGAAGAAGCACTACCAGATTCTACTCATCCAAACGCTGTTTTACTTCTGGCTTTCCAAATGCGTCCACGTTTCGCCGCAGCTTCGTGTGCCAAGTCGCGAGCACCGATTTCGAATCCGCCGCCAAAGCTGGCGAGGATCGTCTCTCTAAGGTGCCGGTGCGTAATATAAGGAACTTCTGCATCATTGCGCATATTGACCACGGGAAATCGACGTTAGCGGATAAATTGCTTCAGGTTACGGGCACGGTGCACCAGCGAGAGATGAAGGATCAGTTTCTGGATAACATGGATTTGGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGTTATGTCTATGAAAATGAACCTTACTGCTTGAATCTAATAGACACTCCGGGGCACGTCGACTTCTCGTATGAGGTTTCTCGGTCACTTGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCCCAGGGGGTTGAAGCACAAACATTAGCGAATGTTTATTTGGCTTTGGAGAACAACCTAGAAATTATCCCAGTTTTGAACAAAATAGATCTTCCAGGTGCAGAACCAGATCGAGTTATCAAGGAAATTGAAGAGATTGTAGGTCTAGATTGTAGCAATGCGATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCAAGAATTCCTTCACCTGAAGATACATCTAAAAGACCACTGAGGGCTTTAATATTTGACAGGTACCCCTTTTTTTTCCCAAATGTTATCAGATTAATCCATTTTGATGACATATGGTGTCGGCAATACACTATGGATTAA 995 0.4462 MAAEICGASLFLSVKTQLQLQQRHKQHVFFHAQRGRTRRSTTRFYSSKRCFTSGFPNASTFRRSFVCQVASTDFESAAKAGEDRLSKVPVRNIRNFCIIAHIDHGKSTLADKLLQVTGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYVYENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEIVGLDCSNAILCSAKEGIGIIDILNAIVARIPSPEDTSKRPLRALIFDRYPFFFPNVIRLIHFDDIWCRQYTMD 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00017 311 PRINTS GTP-binding elongation factor signature 95 108 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 PRINTS GTP-binding elongation factor signature 214 223 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 PRINTS GTP-binding elongation factor signature 178 189 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 PRINTS GTP-binding elongation factor signature 162 172 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 PRINTS GTP-binding elongation factor signature 138 146 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 Gene3D - 90 273 IPR027417 -
Pste2g00017 311 NCBIfam small GTP-binding protein domain 94 263 IPR005225 GO:0005525
Pste2g00017 311 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 131 146 IPR031157 -
Pste2g00017 311 FunFam Elongation factor 4 90 273 - -
Pste2g00017 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 288 IPR027417 -
Pste2g00017 311 CDD LepA 94 271 - -
Pste2g00017 311 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 91 272 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 Pfam Elongation factor Tu GTP binding domain 92 270 IPR000795 GO:0003924|GO:0005525
Pste2g00017 311 PANTHER TRANSLATION FACTOR GUF1-RELATED 69 287 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00017 Pste-Chr2 77849 87110 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00017 91 222 Eukaryotic Initiation Factors Gene Family AT3G22980 45.926 2.64e-27 110