Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04381 GGGGCATCTGAGGTGGTGTCAAGTTGGTCTTTTTCTTCTCAAAATGTGTTGCTTTGACTTTGAAGCACTTCGTTTGGTGGGGTGTGTTCACATTTTCCTTGAGTTGGGCTTGTGGGTACACACGGGTGTGCTAAAGTTTGCACTTTTCTGACACATGTTTGTGATTTTTTGTTTACACGAGTTACTGCAACTTAAGGGTTTTTGGTGCTGCTGCTACAGTTTGTGACTTTGTTTTTCTCTCTGTGGTATTCACTGTGTCCTTGTGATTGGAGTTCACTTTATGGTCTGTAAGGGGTTTTGGGTTTTCATTTTGTTGAGCTTTAGAGGAATTGATGATGTGGCGGTGAGAATGATGTATGGGGAGTAGAACTACCAGGATTGTTGGTGTTGAAGATGACAAGGGAGCTGGAAGAGTGATGCCGAGCTTCAATGCTGAGTTGCCCATTTCCACTTCATGGGAGAGACATTTCTATAAAGAGGGGAGCACAATTGATTCTTTTCATGTTTCTGACTTTGGAGCATTTGATCAATCATATCAAGTAGAGGATGACCTCAGTGGAAACCCAGTTTACGACTCACTAAAAGTAAATAGCCAAACAAGTTCTCCGGGTTCTGTTCACGTTAGTAGCCTTGGTCAGTTGTCAACTTCATTTGATAAAATCCCATTGACGAATCAACCAGAGCTGCATAGGTTGCGATTACAGAAATTTCAATCATCAAATCCTGGTACTGTATTAGTTGGTAATACAGATAACCAGGAGGAGTCTGCCATGGCTGATGCTAGTCCTAGGACTGATATCTCTACAGATGTTGACACGGATGACAAGAATCAGCCGTTTGATAGAAATCAACCCCTTGCTGCTGTTTCTGACTCTAGTGACAGGTCGAAAGAGAAAACAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAACCGTGAAGCTGCAAGAAAAAGTCGTTTGAGAAAGAAAGCCTATGTCCAACAATTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATCTTCATATCAAACTCGGGTGATCAAGCACATACATTGAGCGGAAATGGGGCAATGCAATTTGATGCGGAATATGCAAGATGGCTGGAAGAGCAGAATCGACAAATGAATGAGCTGAGAGCAGCTGTAAATTCTCATGCAAGTGACACTGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGATGACATTTTTAGGTTGAAAGGTGTTGCAGCTAAGGCTGATGTTTTCCATTTATTGTCTGGTATGTGGAAAACCCCTGCGGAGAGGTGTTTTTTGTGGCTTGGTGGATTTCGGTCATCTGAACTCCTCAAGCTGCTGATAAATCAATTGGAACCTCTCACAGAGCAGCAGCTGATGGGTATCACCAACTTGCAGCAATCCTCCCAACAAGCAGAGGATGCGTTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCGGAGACATTGTCCGCCGGAGCTCCTGCCTCATCTGGTTCTTCAGGGAATGTAGCAAATTATATGGGTCAAATGGCTATGGCTATGGGTAAGCTAGGGACACTTGAAGGGTTCATTCGACAGGCTGACAATCTTCGCCAGCAGACTCTACAACAAATGCACCGTATACTGACAACTCGCCAATCGGCTCGTGCCCTCCTTGCCATACATGACTATTTTTCGCGGCTTCGAGCTCTAAGTTCGCTCTGGCTAGCTCGGCCAAGAGATTGATGGGTGTGGTAAATAGTATGTTAAATTAATTGTCAGGGATTCATCACCAGCAATACTTGGCCATCATAGGTTTTACTCTTGACAAGTTTTTTCTTGTGTTGTAGTCTTTGTATCACTGATGATGTTAGTGCTTCATTGTGTCACGGTCTAGAAATGAAATTGATGACAAGTATGCTTGTTGTGTACTAATAATATTCACCATTGTAATTGTTGAATGGCCTTGTTTCTTCCATACAAATATAGTTGGGCTATGATATATTTTAAGAGTTGTTTCGGTTGCCGTTGTTTTCTCAAGGATCTATATATTACAAATTACTAAGTGGTTATTCTTTTATTGACCATCAATAGG 2115 0.4303 MGSRTTRIVGVEDDKGAGRVMPSFNAELPISTSWERHFYKEGSTIDSFHVSDFGAFDQSYQVEDDLSGNPVYDSLKVNSQTSSPGSVHVSSLGQLSTSFDKIPLTNQPELHRLRLQKFQSSNPGTVLVGNTDNQEESAMADASPRTDISTDVDTDDKNQPFDRNQPLAAVSDSSDRSKEKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISNSGDQAHTLSGNGAMQFDAEYARWLEEQNRQMNELRAAVNSHASDTELRMIVDGILAHYDDIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLINQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSAGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04381 469 MobiDBLite consensus disorder prediction 117 187 - -
Pste1g04381 469 Gene3D - 183 235 - -
Pste1g04381 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Pste1g04381 469 MobiDBLite consensus disorder prediction 173 187 - -
Pste1g04381 469 FunFam BZIP family transcription factor 183 232 - -
Pste1g04381 469 Pfam bZIP transcription factor 184 224 IPR004827 GO:0003700|GO:0006355
Pste1g04381 469 Coils Coil 260 280 - -
Pste1g04381 469 CDD bZIP_HBP1b-like 184 235 - -
Pste1g04381 469 MobiDBLite consensus disorder prediction 117 144 - -
Pste1g04381 469 Pfam Seed dormancy control 266 341 IPR025422 GO:0006351|GO:0043565
Pste1g04381 469 ProSiteProfiles DOG1 domain profile. 249 466 IPR025422 GO:0006351|GO:0043565
Pste1g04381 469 PANTHER TRANSCRIPTION FACTOR TGA9 121 468 - -
Pste1g04381 469 Coils Coil 203 230 - -
Pste1g04381 469 SMART brlzneu 180 243 IPR004827 GO:0003700|GO:0006355
Pste1g04381 469 SUPERFAMILY Leucine zipper domain 184 227 IPR046347 GO:0003700|GO:0006355
Pste1g04381 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04381 Pste-Chr1 29938584 29956135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04381 139 469 bZIP Transcription Factor Family AT3G12250 79.456 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g04381 DOG1 8e-33 No_clan