Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04380 GGAAAGGGAAGATTTGATCAGAAGACATCTAGTGATTGGAATCATCCGTGTCCCTCTCTCTGACCCCTCTTTCTCTCTCTTCCCTCTGTTTCGTTACTTTAGTCCAATAATCCAATAACTACATACAAAGTTGGACATTTCATCGTCATAAAGCATCATCATCAAAATTCTAAGGTTTTCATGTTTTGTTGAGCCACAAGGTGAATTGTTGATGTGGTGGTACGAATGATGTATGGGGTGTAGAACTACCAGGGTTGTTGGTGTTGAAGATGACAAGGGAGCTGAAAGAGGGATGCCGAGCTTCAATCCTGAGCTGCCCATTTCCAATTCATGCTATACAGAGGGGAGCACAATTGATTCTTTTCGTGTTTCTGACTTTGGAACATTTGATCAGTTATATCGCGTAGATGATGCTGTTGACCTTAGCGGAAACTCAGTTTACAACTCATTGAAAGTAAATAGCCAAACAATTTCTCCAGGTTCTGTTCATATTAGTAGCCGTGGTCAGTTGCCAACTTCACTTGATAAAAGCCCTTTGACGAATCAAACAGAGCTGCCTAGGTTGCGATTACAGAAGGTTCAATCATCAAATCCTGACACCATATTAGCTGGTAACACTGATAACCAGGAGGAGTCTGCCATGGCTGATGCCAGTCCTAGGACTGATATCTCTACAGATGTTGACACTGATGACAAGCATCCGTTTGATAGAAATCAAGCCCTTGCTGCTGTTTCTGACTCCAGTGACAGGTCGAAAGATAAAACAGATCAGAAGACTCTACGCAGGCTTGCTCAGAACCGTGAAGCTGCTAGAAAAAGCCGTTTGAGAAAGAAAGCCTATGTCCAACAATTGGAAAGTAGTCGTTTGAAGCTGACCCAACTTGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATCTTCATATCTAGCTCGGGTGATCAATCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCAAGGTGGTTGGAAGAGCAGAATCGACAAATTAATGAGCTGAGAGCAGCTGTAAATTCTCATGCAAGTGACACTGAACTTCGTATGATTGTTGACGGTATATTGGCACATTATGATGAGATTTTTAGGCTGAAAGGGGTTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGTATGTGGAAAACACCTGCCGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGGTCATCTGAACTCCTCAAGCTGCTGGTAAATCAACTGGAACCTCTCACAGAACAGCAACTGATGGGTATAACAAACTTACAGCAATCCTCCCAACAAGCAGAAGATGCGTTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCAGAGACATTGTCCACTGGAGCACCTGCCTCATCTGGTTCATCGGGAAACGTTGCTAATTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGGACACTTGAAGGGTTCATTCGACAGCAAATGCTCCGAATTCTGACAACTCGTCAATCAGCTCGTGCCCTACTTGCTATACATGATTATTTTTCACGGCTTCGAGCTCTTAGTTCGCTCTGGCTGGCTCGCCCAAGAGATTGA 1603 0.4429 MGCRTTRVVGVEDDKGAERGMPSFNPELPISNSCYTEGSTIDSFRVSDFGTFDQLYRVDDAVDLSGNSVYNSLKVNSQTISPGSVHISSRGQLPTSLDKSPLTNQTELPRLRLQKVQSSNPDTILAGNTDNQEESAMADASPRTDISTDVDTDDKHPFDRNQALAAVSDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQQMLRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04380 456 MobiDBLite consensus disorder prediction 146 160 - -
Pste1g04380 456 FunFam BZIP family transcription factor 180 229 - -
Pste1g04380 456 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 184 199 IPR004827 GO:0003700|GO:0006355
Pste1g04380 456 Pfam Seed dormancy control 263 338 IPR025422 GO:0006351|GO:0043565
Pste1g04380 456 SUPERFAMILY Leucine zipper domain 181 224 IPR046347 GO:0003700|GO:0006355
Pste1g04380 456 Pfam bZIP transcription factor 181 221 IPR004827 GO:0003700|GO:0006355
Pste1g04380 456 ProSiteProfiles DOG1 domain profile. 246 453 IPR025422 GO:0006351|GO:0043565
Pste1g04380 456 SMART brlzneu 177 240 IPR004827 GO:0003700|GO:0006355
Pste1g04380 456 CDD bZIP_HBP1b-like 181 233 - -
Pste1g04380 456 MobiDBLite consensus disorder prediction 82 142 - -
Pste1g04380 456 Coils Coil 200 227 - -
Pste1g04380 456 Coils Coil 257 277 - -
Pste1g04380 456 MobiDBLite consensus disorder prediction 82 183 - -
Pste1g04380 456 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 179 223 IPR004827 GO:0003700|GO:0006355
Pste1g04380 456 PANTHER TRANSCRIPTION FACTOR TGA9 127 455 - -
Pste1g04380 456 Gene3D - 180 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04380 Pste-Chr1 29917796 29929002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04380 137 456 bZIP Transcription Factor Family AT3G12250 77.341 4.04e-180 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste1g04380 DOG1 7e-33 No_clan