Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04371 CCAAAACCAAAACCAAAACCAAGACCAAGATCAAAACAAAAACAACAACAACCCTTCTTCTATGCTCAAAGAAGAGTGTAGTGTGAGAAAACCATTTGGAGGGGGAGACAGAGTGAAGAGAGATGAGTGGAGTGAAGGAGCAGTGTCAACGCTTCTTGAAGCTTACGAGGCCAAATGGGTGCTTAGAAACAGAGCCAAACTCAAGGGTCACGATTGGGAGGACGTGGCGCGGCACGTGTCCTCACGTGCCAACTGCAGCAAGTCACCCAAAACTTCAACGCAGTGTAAGAACAAGGTTGAGTCCATGAAGAAGAGGTATAGATCGGAATCAGCAACTTTAGATCATTCTTCCTCGTGGCCTCTTTATTCCAGGCTCGATCTTCTTCTCAGGGGAACTGGCCCAGTGGCGGCCCCGCCGCTCGAACCGTCGCTACCGCCGCCGCAGGAGCCGCCTTCTGCGCCTCCTGCGGTTGCCCAAAACTCGCATGGATCCAATGGGGTTGAAGATAAGCTTGTCAAGGAAGATGGGTTAGGAACTAAGTCATCTGATCATGTATCAAGCAAGAATCCATTGGACACAGATAGTAGCACCCCTGCACTTTATAGCAAGAAGGAGGAGTTAAGATGTAACAAGAGGAAGAAGAGAATAATTGATAACACAGGGAGAAGAAGGAAAGAATATGTGGAGATAGCGGAGAGTTTAAGATGGCTAGCAGAAGCTATGATAAGGTCAGAACAAGCAAGAATGGACACAATGAAGGAGATAGAGAGGATGAGAGTTGAAGCTGAAGCCAAGAGAGGGGAAATGGACCTTAAGAGAACTGAAATAATTGCCAATACACAATTAGAGATTGCTAGGATCTTTGCTAGTGTCAACAAAGGTGTTGATTCTTCCCTAAGAATTGGAAGAACTTGAAAGGGTATAGATTGTGGAAGCTAATTAATAA 947 0.4604 MLKEECSVRKPFGGGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCSKSPKTSTQCKNKVESMKKRYRSESATLDHSSSWPLYSRLDLLLRGTGPVAAPPLEPSLPPPQEPPSAPPAVAQNSHGSNGVEDKLVKEDGLGTKSSDHVSSKNPLDTDSSTPALYSKKEELRCNKRKKRIIDNTGRRRKEYVEIAESLRWLAEAMIRSEQARMDTMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGVDSSLRIGRT 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04371 284 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 270 IPR044823 -
Pste1g04371 284 MobiDBLite consensus disorder prediction 113 183 - -
Pste1g04371 284 MobiDBLite consensus disorder prediction 162 178 - -
Pste1g04371 284 MobiDBLite consensus disorder prediction 118 134 - -
Pste1g04371 284 FunFam Trihelix transcription factor ASIL2 23 88 - -
Pste1g04371 284 MobiDBLite consensus disorder prediction 147 161 - -
Pste1g04371 284 Gene3D - 23 88 - -
Pste1g04371 284 Pfam Myb/SANT-like DNA-binding domain 20 107 IPR044822 -
Pste1g04371 284 MobiDBLite consensus disorder prediction 63 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04371 Pste-Chr1 29749365 29754822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04371 10 115 Trihelix Transcription Factor Family AT3G14180 36.697 3.33e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste1g04371 Myb_DNA-bind_4 1e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04371 1 29749365 29754822 Pste1g04371 1 29749365 29754822 ECH