Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04360 CCCATTTATATCCAAAATGGGCCGGGCCGAGATTTTTCGTTGTTTCGTTACATCGTATATGAACTCCATAAACCAAGCCGAGAAACCCTAGAGTCAGCTTCTTCCTCTGCGCAGGGTTATTCAACAGCTAGGGTTTCCTCAATGGCTCCGTCCAAAGTTGATGGTTCTAAGAAGAGTGATGCAAAGACACAGGCCTTGAAGACTGCTAAGGCAGTGAAGTCTGGTGCTACCTTCAAGAAGAAGGCGAAGAAGATAAGAACTTCTGTGACATTCCACAGGCCGAAGACATTGAAGAAGGATAGGAACCCCAAGTACCCTCGCATCAGTGCGCCACCAAGGAATAAGCTTGACCATTATCAGATCCTGAAGTACCCTCTCACCACTGAGTCTGCTATGAAGAAGATTGAGGACAACAACACTTTGGTTTTCATTGTTGACCTGCGTGCTGACAAGAAGAAGATCAAGGATGCGGTCAAGAAAATGTATGACATCCAGGCCAAGAAAGTTAACACCTTGATCAGGCCTGATGGCACCAAGAAGGCCTACGTTAGGTTGACTCCTGATTACGACGCATTGGATGTGGCAAACAAGATCGGGATTATCTAAAGGTAGTACCTGGGTTTTATTAAATTTTAAGCAGTTCTATGGTGATCGTTCTTGAGGGAAACATTTAGAAAGAATATAGGTTCTATGTTTTGTGCTTCTTTATTTTGTATCTTTGGTTCATTTGACACTCAGCAGACCTTGTGGTTCAATTTTGACTACAGAGCTCTTTAAACATTAAATTTATGATTGAAATGAGCATGTAAAAATATTCTCATTGAGTGAGTTGGTACTCACAGAACGTGAGGCTGATGAGTGTCCCAAAGTTGATTGCTTAAAACATGTGGGGTTAAGGAAATTGTATAGGGTACGTAGTCTGGTA 925 0.4238 PIYIQNGPGRDFSLFRYIVYELHKPSRETLESASSSAQGYSTARVSSMAPSKVDGSKKSDAKTQALKTAKAVKSGATFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04360 201 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 118 194 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pste1g04360 201 PANTHER 60S RIBOSOMAL PROTEIN L23A 53 201 IPR013025 GO:0003735|GO:0005840|GO:0006412
Pste1g04360 201 FunFam 60S ribosomal protein L23a 81 201 - -
Pste1g04360 201 ProSitePatterns Ribosomal protein L23 signature. 179 194 IPR001014 GO:0019843
Pste1g04360 201 Gene3D - 82 201 IPR012677 -
Pste1g04360 201 MobiDBLite consensus disorder prediction 28 65 - -
Pste1g04360 201 MobiDBLite consensus disorder prediction 29 53 - -
Pste1g04360 201 Pfam Ribosomal protein L23, N-terminal domain 61 111 IPR005633 -
Pste1g04360 201 NCBIfam 50S ribosomal protein L23 125 201 IPR019985 GO:0003735|GO:0005840|GO:0006412
Pste1g04360 201 Hamap 50S ribosomal protein L23 [rplW]. 121 201 IPR013025 GO:0003735|GO:0005840|GO:0006412
Pste1g04360 201 Pfam Ribosomal protein L23 121 183 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04360 Pste-Chr1 29399486 29401794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04360 48 201 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 86.364 7.64e-70 208