Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04310 ATGTATGGTGAATACCTCATGCATTATTCAGTTGGAACCCCACCATTCCATCTATTTGGTATTGTTGATACAGGTAGTAACCTTGTTTGGCTACAGTGTCAACCTTGTAAAAATTGTTATAGTCAAACCAATCCTATATTTGACCCTTCAAAATCCAACACATACAAAAATCTACGTTGCACTTCTTCTGCTCAATGTCCATTTAAACGATCCATTTGCTCTTCAAAAAACAAATGTGAATATAAAGCTAAGTATATTGATGGATCACATTCCCGTGGAGATCTTAGTTTTGAGACACTCACTTTAGCCTCCACAAATGGTTCTCCTATCAAATTTCCTCAAATTATGATAGGGTGCGGATATGAAAATGTTGGGACCTATGGACGAGGAAGCTCCGGTATAGTTGGCCTCGGAGGTGGAGCTGTATCCCTTGTAAATCAATTGGGTTCTTCAATACATGGAAAATTTTCTTATTGTTTAACAAGACTGTTTTCATCAACATCTAGTTCATCTAGCAAACTCAATTTTGGAGATGCTGCTTTGGTTTCTGGACAGGGTACTGTCTCAACCCCTTTATTCATACACAAGGATGTATATTACTACCTAAATTTGGAAGCAATTAGTGTGGGAAACAAGAGATTAAATTTTAAAAGCTCCTTGTTTAAAATGTCTAGTGGAAAGGGAAACATCATAATTGACTCAGGTACAACACTCACCCTTTTACCAGATAAGGCTTACTCCAAATTGGAATCAATGGTAGCATCTGTAATTCGTTTAAGGCGTGTTGAGATTCCAGGCAGATACATGACCCTATGCTATAGATTTACTAAATGCACCAGAAATTACAGCACATTTTGA 858 0.3718 MYGEYLMHYSVGTPPFHLFGIVDTGSNLVWLQCQPCKNCYSQTNPIFDPSKSNTYKNLRCTSSAQCPFKRSICSSKNKCEYKAKYIDGSHSRGDLSFETLTLASTNGSPIKFPQIMIGCGYENVGTYGRGSSGIVGLGGGAVSLVNQLGSSIHGKFSYCLTRLFSSTSSSSSKLNFGDAALVSGQGTVSTPLFIHKDVYYYLNLEAISVGNKRLNFKSSLFKMSSGKGNIIIDSGTTLTLLPDKAYSKLESMVASVIRLRRVEIPGRYMTLCYRFTKCTRNYSTF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04310 285 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 230 241 IPR001969 GO:0004190|GO:0006508
Pste1g04310 285 Pfam Xylanase inhibitor C-terminal 200 280 IPR032799 -
Pste1g04310 285 SUPERFAMILY Acid proteases 2 278 IPR021109 -
Pste1g04310 285 Gene3D Acid Proteases 177 285 IPR021109 -
Pste1g04310 285 CDD pepsin_A_like_plant 4 250 IPR034161 -
Pste1g04310 285 Gene3D Acid Proteases 1 176 IPR021109 -
Pste1g04310 285 ProSiteProfiles Peptidase family A1 domain profile. 5 285 IPR033121 -
Pste1g04310 285 FunFam Probable aspartic protease At2g35615 1 177 - -
Pste1g04310 285 Pfam Xylanase inhibitor N-terminal 5 178 IPR032861 -
Pste1g04310 285 PANTHER OS07G0603500 PROTEIN-RELATED 2 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04310 Pste-Chr1 28165744 28166601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04310 3 277 Miscellaneous Gene Families AT1G44130 29.021 3.75e-20 87.8