Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04280 CTAGAGACACCCTACTGTACAACTACTCTTGCTGTGGGAGCTTTTTCTGTCCTCTTGTTCTTCCTCGTACGATGGCTCAGATCACATAATAAGGCACTTAATCAAGTACCAGTGGTTCCTGGATTACCAGTTGTAGGGAATCTTTTCCAATTGAAAGAGAAGAAACCCTACAAGGCATTCACACAGTTGGCTTACAAATATGGCCCCATTTATTCCATCAAAATTGGTGCTAACCCTCTCATTGTTCTCAACTCTACCCCCCTTGCTAAGGAGGCCATGGTGACCAAATTTTCATCAATTTCAACAAGGAAGCTATCAAATGCACTCCATATTCTGACTTCTGATAAATGCATGGTGGCCACAAGTGACTATGATGATTTTCACAAAAATATTAAAAAACATATTCTTACACATTTTTTGGGAGCCAAAGCCCAGAAGCGACTCCGTGGCAATAGAGATGGTATGAGGGACAATATTTTGAACCGGATCAAGGAGCAAGTGAAGACCACCCCTGAAGTGCCAGTTAATTTTAAGAAAATATTCTCCTCTGAACTTTTTGGATTATCATTGAAACAAGCTCTGGGAAGTAATGTACAGTCCGTTTATGTGGAGGAGTTTGGGCGTACATTAACAAATCAGGACTTATATCAGTATCTGGTGGTTAATATAATTGAGGGTGCAATTGAGGTGGATTGGAGAGATTTTTTTCCATACTTGAAGTGGATTCCAAATAAGAGCATGGAGAAGAAAATTCATGACGTACTAGATTGTTATTATGACTACCTGGTAACCGAGGCTAAAGAACTGACTGAATATCAAGTTTCCATGCTAACCTGGGAGACCATTATTGAGACATCTGATACTACATTGGTTACAACAGAATGGGCTATGTATGAACTTTCTAAAGACAAAACTCGTCAGGAGCGACTTTATGAGGAGCTCAAAAGAGTATGTGGAGATGAAGATGTTACAGAAGAGCACTTAGCCAAGCTACCTTACTTGGGGGCAGTATTCCATGAAACTTTAAGGAAGCATAGTCCAGCTGCAATTATACCACCAAGATATAATAGGTGGGAAAATCCTGAGGAGTGGAAGCCTGAGAGATTTGAGGATGGCAAACATGACCCTTTGGATTTATACAAGACTATGGCATTTGGAGCAGGGAAAAGAGTGTGTGCAGGTTCTCTTATGGCCATGTTGTTAGTGTGCACCACAATAGGGAGATTGGTAAAGCAGTTTGAGTGGGAACTTGCAGAAGGTGAGGAAGAGAAAGTGGATACAGCTGGCCTTACAGCCCACAAGTTCCATCCCCTTCTAGTAAATCTCAAGCCAAGAAAT 1338 0.4118 LETPYCTTTLAVGAFSVLLFFLVRWLRSHNKALNQVPVVPGLPVVGNLFQLKEKKPYKAFTQLAYKYGPIYSIKIGANPLIVLNSTPLAKEAMVTKFSSISTRKLSNALHILTSDKCMVATSDYDDFHKNIKKHILTHFLGAKAQKRLRGNRDGMRDNILNRIKEQVKTTPEVPVNFKKIFSSELFGLSLKQALGSNVQSVYVEEFGRTLTNQDLYQYLVVNIIEGAIEVDWRDFFPYLKWIPNKSMEKKIHDVLDCYYDYLVTEAKELTEYQVSMLTWETIIETSDTTLVTTEWAMYELSKDKTRQERLYEELKRVCGDEDVTEEHLAKLPYLGAVFHETLRKHSPAAIIPPRYNRWENPEEWKPERFEDGKHDPLDLYKTMAFGAGKRVCAGSLMAMLLVCTTIGRLVKQFEWELAEGEEEKVDTAGLTAHKFHPLLVNLKPRN 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04280 446 Pfam Cytochrome P450 358 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 Pfam Cytochrome P450 39 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 10 253 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Pste1g04280 446 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 SUPERFAMILY Cytochrome P450 31 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 Gene3D Cytochrome P450 26 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 385 394 IPR017972 GO:0005506|GO:0016705
Pste1g04280 446 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04280 446 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04280 Pste-Chr1 27461749 27465073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04280 28 445 Cytochrome P450 AT5G25900 54.025 8.82e-180 510