Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04271 CTCCCTTTCCTTCAATCAAGTTGTCATTTGCTTTCTAGGTTGTTGTTTGGATCCAAACTTAATTCTCCCAAACATTAGTTTCATTGTTTGATCTGGAAGTCACCATGACATATGAGGTTCAACATCCTAGAATCACTGAGAAGGTTGCAGGCCATTTGAATCTTCGTAGAGGCCTTCCTTTGTACCAAAGGAGAAACTCACTAGCAAATTACTCTAATGCTGCCTCATTCAGGAACTATTCAAATGTGGCATTACAGTATCCTATTATACCAACATACAGAACAACAGTTGATGTATCCACTGTTGCAACAACAACATCTCCTATGTTTGTTGCAGCTCCTGCTGAGAAGAAGGGAAACTTCATGATTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTGTCCAAAACTGCGGCTGCCCCCATTGAACGTGTTAAACTTTTGATCCAAAACCAAGATGAGATGATTAAAGCTGGTAGACTCTCTGAGCCCTATAAGGGCATTGGTGATTGTTTCAAGAGAACAATTCAGGATGAAGGTGTTATGTCCTTGTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCTACTCAAGCTCTAAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGAGAGGGATGGTTATTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCATCATCTCTTTTCTTTGTCTATTCTCTTGACTATGCTCGTACTCGTCTAGCCAATGATGCTAAGGCTGCAAAGAAGGGTGGTGGAGGAAGACAATTCGATGGTCTCATCGATGTTTATAAGAAGACATTAGCATCTGATGGTGTTGCTGGTCTTTACCGTGGCTTCAACATTTCTTGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCTCTTAAGCCAGTTCTCCTAACTGGCTCTTTAGAGGATAGTTTCTTCGCAAGCTTTGCCCTAGGATGGCTCATCACAAATGGTGCAGGTTTAGCCTCATACCCAATTGACACAGTTAGAAGAAGAATGATGATGACATCAGGAGAAGCTGTGAAATACAAGAGCTCCATGCATGCATTTAACCAAATCCTCAAGAATGAGGGTGCCAAGTCCTTGTTTAAAGGAGCTGGTGCTAACATCCTTCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAGGTCATAGTGTTTGGGAAAAAATATGGTTCTGGTGGTGCTTAATTTTCTAGCTCCATGTTCTCATTTTAGTCATGTCTGGTAATGAATACCATTGGGTTTGGTAATTAACCAAATGCTAAGGCAAATTTTGTTCAATAAGTT 1367 0.417 MTYEVQHPRITEKVAGHLNLRRGLPLYQRRNSLANYSNAASFRNYSNVALQYPIIPTYRTTVDVSTVATTTSPMFVAAPAEKKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGVMSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKERDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGGRQFDGLIDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLEDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMHAFNQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04271 387 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Pste1g04271 387 FunFam ADP,ATP carrier protein, mitochondrial 87 383 - -
Pste1g04271 387 PRINTS Mitochondrial carrier protein signature 299 321 IPR002067 GO:0055085
Pste1g04271 387 PRINTS Mitochondrial carrier protein signature 255 273 IPR002067 GO:0055085
Pste1g04271 387 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Pste1g04271 387 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Pste1g04271 387 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Pste1g04271 387 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Pste1g04271 387 SUPERFAMILY Mitochondrial carrier 83 372 IPR023395 -
Pste1g04271 387 Gene3D Mitochondrial carrier domain 87 383 IPR023395 -
Pste1g04271 387 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 282 IPR018108 -
Pste1g04271 387 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 376 IPR018108 -
Pste1g04271 387 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 80 386 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pste1g04271 387 Pfam Mitochondrial carrier protein 188 285 IPR018108 -
Pste1g04271 387 Pfam Mitochondrial carrier protein 85 181 IPR018108 -
Pste1g04271 387 Pfam Mitochondrial carrier protein 291 376 IPR018108 -
Pste1g04271 387 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pste1g04271 387 PRINTS Adenine nucleotide translocator signature 295 311 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pste1g04271 387 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pste1g04271 387 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pste1g04271 387 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04271 Pste-Chr1 27291535 27295636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04271 1 387 Antiporters AT5G13490 78.426 0.0 591