Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04263 GAACTAGTACTAATTCCCATGAACAAACCATGCATTTTTCTTGAAGGAGCTGATAAAAACTCTACAAGTATTGAGTGGGGTGATCATCTTAATCCCACCTTCTATACAAAAGCAAATAATACCATTGCAATGGGAATTACTTTCACGAACACACTTAACGAGCCTATATTGGTAGATACTAATATTACACAAGCTGTGGCAGCTCGAATTCAGGCAGATAAATGTGCTTTCTATGATTGTGCATTCTTAGGAGTGCAAGACACCTTATATGATAATTCCGGTCGCCATTATTATCGTAATTGCTACATTCAAGGTGGAATTGATTTCATATTTGGAAATGGTCAATCAATTTATGAGGCAAGTGACATACATTTTTCAACGGGAAAATATGGTCCCAACATAAATGGGGTTTTTACAGCACAAGAAAGGAATTCATCCAATGATACCAGTGGATTTGTCTTTAAAAACTGTAACTTCAAAGGGAAAAGAGCACAAGCTATACTAGGAAGATCTTTAAGAGCTTATGCCAGAGTCATCATAGCCAACTCATACCTATCAAATGTGGTTACACCTAAGGGTTGGAATGCTCGTACCTTTGTTGGTCATGAAGAAACCATCACATTTGTGGAAGAAGGAAACAGAGGACCTGGGGCAAATAAATCCAATCGTGTGAAATGGATGAAGCATTTGAGTGGACCTGCACTTGATTACTTTCTAAATATTTCTTTTATTGATGATGAAGGGTGGATTGCAAAATTACCATCGAAGGACTTCATTTGA 780 0.3731 ELVLIPMNKPCIFLEGADKNSTSIEWGDHLNPTFYTKANNTIAMGITFTNTLNEPILVDTNITQAVAARIQADKCAFYDCAFLGVQDTLYDNSGRHYYRNCYIQGGIDFIFGNGQSIYEASDIHFSTGKYGPNINGVFTAQERNSSNDTSGFVFKNCNFKGKRAQAILGRSLRAYARVIIANSYLSNVVTPKGWNARTFVGHEETITFVEEGNRGPGANKSNRVKWMKHLSGPALDYFLNISFIDDEGWIAKLPSKDFI 259
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04263 259 Gene3D - 1 257 IPR012334 -
Pste1g04263 259 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 251 - -
Pste1g04263 259 Pfam Pectinesterase 28 228 IPR000070 GO:0030599|GO:0042545
Pste1g04263 259 SUPERFAMILY Pectin lyase-like 1 251 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste1g04263 Pste-Chr1 27043366 27045664 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04263 1 250 Carbohydrate Esterase AT1G05310 38.697 1.64e-54 179