Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04254 GTTATGAAATGGATGGGAGAGGGGGTATTCATTTTCAAGAACAACTTATTTTTAATGTTCTAAAAACAAAGGTAAAGATATACAGTGTAGAGATGGGAACAAATATGATTGAGAACAGACTTTTTGGAAAAAGGGTACTCATTGTACTTGATAATGTGAATAAGTTTGTCCAATTAAAACCTGGGACTGAAGCTGTTGAGGGATTGGCTTTGAAGTTGCACTTGACCAGTAGAGACTGCTTTAAAGCTGATGCTTTTGAGGAGATGAAGAGAATCAGATTGTTGCAACTTGATCATGTACAACTCCCTGGAGATTATGGGTATCTTTCTAAGCAACTGAGATGGATTTATTGGCGAGGATTTCCTTTAAAGTATATCCCTAACAACTTTTATCTGAAAAGTGTAATTGGGATTGATTTAAAACACAGTAATCTTAGACTATTTTGGAAAGAATCCCAGATTTTGGGGTGTCTAAAATTCCTCAATCTCAGCCATTCCAAGTACTTAAGAGAAACCCCTGACTTTTCAAAACTACCAAATCTTGAAAAGCTCACTCTCAAAGATTGTCCACGCTTGTGCAAGGTACACCAGTCCATTGGAGTTCTCAGCAATCTTATTCTAATAAATTTGAAGGACTGTATAAGTCTTGTCAATCTGCCAAAGAGTCTGAAATCTGTGAAGACTCTCATCCTTTCTGGTTGTTTGAAGATTGAAGAATTGAAAGAAGACATAGGGCAGATGGAATCCTTGACAACACTAATTGCAGAAAATACTGCCGTGAAACAGGTGCCCTTTTCTATAGTAAGATCAAAAAGCATTGGATATATATCCCTATGTGGATTTGAAGGATTAGCACTTAATGTGTTTCCTTCTATCATTTTATCCTGGATGTCACCATCAATGAATCCCATATCTCGTATTCCTTCATTTGGGGGCAAATTGTCTCTAGTTTCCATGGATATGCAGAACAGGAATTTGAGTGATCTAGCACCAATATTTAGCAGCCTTTCAAATCTCCGAAGTGTTTTGGTGCAATGTGATACAGAGTTTCAACTATCTAAACAATTAAGAACAATTTTGCATGATCTATATGGTGTAAATCTTAGTGAATTAGGAATACCATCAAATACATCACAAATTCCCAAGCAACCCTGGGAGTTTTATTTGATTCATGTTGGAAGCTGCGAAGGAGTCATCAATACACTCAGCAAGAGCATCTCCCAGGGATTGGAAACCAGTGAGGATTGGGATGTTTTTCTCCCAGGTGACAATCATCCTTATTGGTTGGCCTACACAGGTGTGGAAAATTCAGTGCATTACATTGTACCAGGGGATTGTCACATAAAAGGAATGGCTTTATATGTTGTTTATTCATCAATCCCTGAAAACATGGCAGATGAATGTCTTATAATTGGCAAGGCATCACATTTGAGATCTGGAGATAAGGTGGAGATTTTTGTGACTTTTGGGCATGGATTGGTGATCAAGAAAACAGCTGTATATCTAATGTATGATGAATCAATTGACATGGAAATCGAGTCTTCTCCTAAGCCAAAGAAAAATGCCTTTGTAAGATTGATAAAGAAAATTGCAAAGAGTAAGATTCAAGAAGAG 1613 0.3714 MDGRGGIHFQEQLIFNVLKTKVKIYSVEMGTNMIENRLFGKRVLIVLDNVNKFVQLKPGTEAVEGLALKLHLTSRDCFKADAFEEMKRIRLLQLDHVQLPGDYGYLSKQLRWIYWRGFPLKYIPNNFYLKSVIGIDLKHSNLRLFWKESQILGCLKFLNLSHSKYLRETPDFSKLPNLEKLTLKDCPRLCKVHQSIGVLSNLILINLKDCISLVNLPKSLKSVKTLILSGCLKIEELKEDIGQMESLTTLIAENTAVKQVPFSIVRSKSIGYISLCGFEGLALNVFPSIILSWMSPSMNPISRIPSFGGKLSLVSMDMQNRNLSDLAPIFSSLSNLRSVLVQCDTEFQLSKQLRTILHDLYGVNLSELGIPSNTSQIPKQPWEFYLIHVGSCEGVINTLSKSISQGLETSEDWDVFLPGDNHPYWLAYTGVENSVHYIVPGDCHIKGMALYVVYSSIPENMADECLIIGKASHLRSGDKVEIFVTFGHGLVIKKTAVYLMYDESIDMEIESSPKPKKNAFVRLIKKIAKSKIQEE 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04254 535 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 283 IPR044974 GO:0006952
Pste1g04254 535 Gene3D Ribonuclease Inhibitor 78 391 IPR032675 -
Pste1g04254 535 SUPERFAMILY L domain-like 75 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04254 Pste-Chr1 26931147 26934158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04254 59 306 WRKY Transcription Factor Family AT4G12020 29.452 3.75e-18 86.7