Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04240 ATGATACTTCATGACAAAGTGGTTTCTTGGTCCTTTGTCATTTTGAAGTTGTTTTGCACTAAGTGCTTTCAGAATTCACATAGAATAGAGTTGGTATATTGGATAATGAAAAGAAAAATATTGAGACATTATTGTTCAGATAGAATAGCAGACCACAGCAATGCGGATGTTGCCATTGATTCATACCACCGCTACAAGGAAGATGTGGCCATGATGAAAGATATTGGATTCAATGCCTACAGGTTCTCCATCTCTTGGCCGAGAATACTACCTCGTGGAAACCTGCAGGGAGGAGTTAACCGAGAAGGCATTGCATATTACAATAATCTGATAAATGAACTGATAGCAAATGGACAACAGCCCTTTATAACATTGTTTCACTCTGATCTCCCTCAAGCTCTTGAAGATGAATACGGTGGTTTTCTGAGTCCCAAAATTGAGCAAGATTTTGCAAATTATGCAGAAGTTTGCTTCAGGGAATTTGGTGACAGGGTTAAGCACTGGATTACATTAAATGAGCCAGTGCTATATAGCACTCAAGGTTATGGAAGTGGAGGATCTCCACCCAATAGATGCTCCAAGTGGTTTGCTAACTGCACTGCTGGTGATTCTACTACTGAGCCCTATGTGGTTACACATCACCTCATTCTTGCTCATGCTGCAGCAGTAAAAGTTTACAGGGAGAAGTACCAGGTTTCTCAGAAGGGTCAAATTGGGGTAACACTGAATTCTGCCTGGCTTGTGCCACTTTCTCAAACAAAAGAGGACAGAGAAGCTGCAGATAGAGGTCTTGCTTTTATGTATGACTGGTTCATGGAACCACTTTACTCTGGTACATATCCTGCTGTAATGGTTAACAAAGTTGGAAGTCGTTTACCAAAGTTTACTAGAAGGGAATACTTGATGGTTAAAGGCTCCTATGATTTCATAGGGTTAAATTATTACACTTCAACTTATGCAACTAGTTCTCCTTGCCCACGCGAAAGGCCAACTGCCTTTACAGATGCTTGCGTTAGATTTACTAATTTAAGAAAAGGGGTTCTCATTGGTCCAAAGGCAGCCTCAGACTGGCTCTACGTCTATCCACCAGGAATTCAAGGTCTACTTGAATACACTAAGGAGAAATTTAACAACCCAGTTATTTACATAACAGAAAATGGAATTGATGAGGTTAATGACGGGAAAATGTTACTTGATGACAGAATGAGAATAAATTATTTCAATCAGCACCTTTTTTATCTTCACAGGGCCAGAAGTCTTCGCTTTGGACTGGTGTATGTGGATTACAAAAATGGACTGAGAAGATACCGTAAAAGATCAGCATTGTGGTTCAAAATATTTCTTCACCAATGA 1353 0.3991 MILHDKVVSWSFVILKLFCTKCFQNSHRIELVYWIMKRKILRHYCSDRIADHSNADVAIDSYHRYKEDVAMMKDIGFNAYRFSISWPRILPRGNLQGGVNREGIAYYNNLINELIANGQQPFITLFHSDLPQALEDEYGGFLSPKIEQDFANYAEVCFREFGDRVKHWITLNEPVLYSTQGYGSGGSPPNRCSKWFANCTAGDSTTEPYVVTHHLILAHAAAVKVYREKYQVSQKGQIGVTLNSAWLVPLSQTKEDREAADRGLAFMYDWFMEPLYSGTYPAVMVNKVGSRLPKFTRREYLMVKGSYDFIGLNYYTSTYATSSPCPRERPTAFTDACVRFTNLRKGVLIGPKAASDWLYVYPPGIQGLLEYTKEKFNNPVIYITENGIDEVNDGKMLLDDRMRINYFNQHLFYLHRARSLRFGLVYVDYKNGLRRYRKRSALWFKIFLHQ 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04240 450 PRINTS Glycosyl hydrolase family 1 signature 421 433 IPR001360 GO:0004553|GO:0005975
Pste1g04240 450 PRINTS Glycosyl hydrolase family 1 signature 381 389 IPR001360 GO:0004553|GO:0005975
Pste1g04240 450 PRINTS Glycosyl hydrolase family 1 signature 306 320 IPR001360 GO:0004553|GO:0005975
Pste1g04240 450 Gene3D Glycosidases 35 449 - -
Pste1g04240 450 PANTHER GLYCOSYL HYDROLASE 40 417 IPR001360 GO:0004553|GO:0005975
Pste1g04240 450 Pfam Glycosyl hydrolase family 1 47 417 IPR001360 GO:0004553|GO:0005975
Pste1g04240 450 SUPERFAMILY (Trans)glycosidases 42 445 IPR017853 -
Pste1g04240 450 FunFam Beta-glucosidase 11 35 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04240 Pste-Chr1 26764466 26768506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04240 47 450 Glycoside Hydrolase AT5G44640 55.116 1.76e-172 492
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04240 1 26764466 26768506 Pste1g04240 1 26764466 26768506 ECH