Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04229 ATGTCTCACCGGAAGTTCGAGCACCCTAGACACGGTTCTCTTGGCTTTCTCCCAAGAAAACGCGCTTCTCGTCATCGTGGAAAGGGTGATCTGTTTTTTTTTTTCGTCTCTGTTTGGTATTGTTCTTCATTTCGAGATTTGAATGATGCTGCAATGTTGAAGGCTTTCCCTAAAGACAATCCTAGCCAACCATGCAGGTTGACGGCCTTTGTGGGCTACAAGGCTGGAATGACCCACATTGTTAGAGAGGTTGAGAAACCTGGCTCAAAGCTTCATAAGAAAGAAACATGTGAAGCTGTTACCATCATTGAAACTCCTCCATTGGTTGTTGTTGGAGTGGTGGGATATGTAAAGACACCTCGTGGGCTACGCACGCTCAACACTGTCTGGGCTCAGCATCTAAGTGAAGAAGTCAAGAGACGCTTTTACAAAAACTGGTGCAAATCTAAAAAGAAGGCATTTACCAAATATACCAAAAAATTTGAAACTGAGGAAGGAAAGAAAGATATTCAATCTCAGCTTGAGAAATTGAAGAAGTATGCAACTGTCATTCGTGTTCTGGCTCATACTCAGATCAGGAAGTTGAAGGGTCTAAAACAGAAGAAAGCTCATTTGATGGAGATCCAAGTTAATGGTGGGACAGTAGACCAGAAGGTGGACTATGCATACAACTTCTTTGAGAAGCAAATCCCTGTGGATGCTGTTTTCCAAAAAGATGAGATGATAGATATCATTGGTGTGACTAAGGGTAAAGGTTATGAAGGTGTTGTAACTCGATGGGGTGTCACTCGCCTTCCGCGCAAGACTCACAGAGGTCTAAGGAAGGTTGCTTGTATTGGTGCTTGGCACCCTGCTCGTGTTTCTTTCACTGTTGCAAGGGCTGGTCAGAATGGATATCATCATCGCACTGAGTTGAATAAAAAGGTCTACAAGGTTGCCAAGGCTGGTCAAGAGTCGCATTCAGCCATCACTGAATTTGACAGGACCGAGAAGGATATTACTCCTATGGGTGGATTTCCTCACTATGGTGTGGTGAAGGATGATTACATTATGGTGAAGGGATGCTGTGTTGGACCCAAGAAGCGGGTTCTCACTCTTCGTCAGTCTCTTCTCAAGCAGACATCTCGAGTGTCTCTTGAAGAGATCAAACTGAAGTTCATCGACACCTCATCCAAGTTTGGACATGGTCGCTTCCAGACCACTCAAGAGAAACAAAAGTTTTACGGTCGGTTGAAGGCATAA 1242 0.442 MSHRKFEHPRHGSLGFLPRKRASRHRGKGDLFFFFVSVWYCSSFRDLNDAAMLKAFPKDNPSQPCRLTAFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYKNWCKSKKKAFTKYTKKFETEEGKKDIQSQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAHLMEIQVNGGTVDQKVDYAYNFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKVAKAGQESHSAITEFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVLTLRQSLLKQTSRVSLEEIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04229 413 Gene3D Translation factors 68 409 - -
Pste1g04229 413 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 408 IPR045077 GO:0003735|GO:0005840|GO:0006412
Pste1g04229 413 FunFam 60S ribosomal protein L3 250 298 - -
Pste1g04229 413 Gene3D Ribosomal protein L3, domain 3 1 32 IPR044892 -
Pste1g04229 413 Gene3D Ribosomal protein L3, domain 3 51 298 IPR044892 -
Pste1g04229 413 FunFam Ribosomal protein L3 289 413 - -
Pste1g04229 413 SUPERFAMILY Translation proteins 4 394 IPR009000 -
Pste1g04229 413 FunFam 60S ribosomal protein L3 107 231 - -
Pste1g04229 413 ProSitePatterns Ribosomal protein L3 signature. 236 259 IPR019926 -
Pste1g04229 413 FunFam 60S ribosomal protein L3 68 172 - -
Pste1g04229 413 Pfam Ribosomal protein L3 49 394 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pste1g04229 413 Pfam Ribosomal protein L3 1 28 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pste1g04229 413 Gene3D - 107 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04229 Pste-Chr1 26631150 26634714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04229 1 410 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 80.976 0.0 681