Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04219 CCGTTGAGTGATGTCTGAAAGTGAAGGGTGTGGCTGTTCTGAGACGGACCACCATTGGTGTGGGTGTTGGTCCGTCAGATCTGAAAGCGCCACCTCGACCGAACTGAAACTCTACAGAGCCTTCATCTTCTCCGTTCCCATTTTCTTCACTCTCATTCTCCTCTTTCTTTTCTACCTTTTCTACCTTCGTCCCCGCACCACCACTAGCCTCCGCCACTTCCCTCTTCCCAATTCCCTCTCCACCGGTTTGAACAAGGAACTCCGCGAGATGCTCCCTGTTATTCTCTACAACCAAAGCTTCTCCGTCAAAGATACGCAGTCATCAGAGGATAGACTGCAACAGATACCTGCATGTGGCCATACATTTCATATGAGCTGCATTGATCTTTGGCTTGCTACCCACACCACCTGCCCGCTTTGCCGCTTCTCCCTACTAACCACCTCTAAATCTTCAACAGAGACATCTGATATGCAGTCACAGAGCAATGAAGAAACACAAGCCATGGAATTTTCAGAGTCAAGATCTACTAGGCATATAGAAACCATTGTCCTCCAAAACGTCTCTGGAGAAGTTGAAATCAACGCTCATAGCATTGATGTTGAAGGGCAAAATGTGCAAACCAATCAATAAGAGCATGATAACATGAGACACTCTTTCTGGTAATTTTTTTCTTTCTTCATTATTATTATTATCAACGTCTGTTCATTTGAGGAGCTAGCACCCGGGAAGGGAACGAGAAAAAGTTGTTTCGTGGAGGAGCTTGCACCTCAATTGGACAAACATTGACAAAGCTACAACTTGGACTACTACTTTTTCTAATTTTGATTTATTACACAGTAGCTTGGTCAGATGGTGAGAGTTGTATTTCATGTAATCAACGTGCTTTTCAATATTCAATCATGTTGAAGGTTGCATAAAATGATCTGTTATTGCACAAGGCTTTATACTTACTGCATTTCTTCTAAACAAGCCTTTTTTTTGTTAGTTTTCTCAATAATTGGTGATTTATATTGGGAAAGGATGACCGGATGAAATAGTAAGGAGACTAGTGATCTACATAAAGAGAAGGGATGGCGAGGGTTAAACCTTGGAATAGTATGGAGGAATGAAAATATTCAATTTATTTAATTGTTAATGTTGTAAATGGTTTAATGCCTTAAAAATCCGTATTCAACTTTTCATAGGAGGGATTTTTTTTTCATCAAAAGGGAATTTTGGATATTGAACTTCATATAACGTTGGATGTCCTCTTTTAGATGATTAGGGGGAGTCTCGAAGAAGAGCTTGTACTAAACTTATTTTAGAGAAGCATATCAATATAGTATTTTTATTGAGAAGTTTCAAAATCAGCTTTATAATAAGCTATTGATTTATAAGAAGTGAAAAATGTGTTTTTGGTACTTATATGTTTTATTAAATTTGATCTATGTCTTGTACTTTATATTGATGAATTTGGTTCTCTAACTTTAAAAAATCATGTGTGTTTGGTCCTTCGTTTATATGAATTCACATGTTTTCTAAAGTTGAGAAAGACTAAATTAACATCATCTTTTAAAGTTTGAGAATCAATTTCATTGACATGAAAATATAAAAACTAGACCAAATTTGAGGAAAAGTATAGGGCTAGAAACAAATAAGTATTTAATTAAGCTGTTTACTGAAACACATTCTAATAAGTTTTTATTTGATAAATTTAATGGTATCTCTGCAAACTTTGAATTCAATAAAATTTTTGTTAGACATATAAAATCATTTATAGCCCTTCACTTAATGGCTTAAGCTTTTGGATGTAGCCATCGACATGACAGAATAGCCCCTATGGCCAAATCAGGACTCAGCAGTTAAATTCTTCTTGCACTCATTCTTCTTACTGTTTGCTTTTCATTTTTTCTTGCTAAAACAGAGAGGTGAGGGTATTTGGTTTGATAAATATTTTCCTCACAAATAATTATAAAAACGGC 1962 0.3619 MSESEGCGCSETDHHWCGCWSVRSESATSTELKLYRAFIFSVPIFFTLILLFLFYLFYLRPRTTTSLRHFPLPNSLSTGLNKELREMLPVILYNQSFSVKDTQSSEDRLQQIPACGHTFHMSCIDLWLATHTTCPLCRFSLLTTSKSSTETSDMQSQSNEETQAMEFSESRSTRHIETIVLQNVSGEVEINAHSIDVEGQNVQTNQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04219 206 ProSiteProfiles Zinc finger RING-type profile. 115 138 IPR001841 -
Pste1g04219 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 142 IPR013083 -
Pste1g04219 206 MobiDBLite consensus disorder prediction 148 170 - -
Pste1g04219 206 PANTHER OS11G0150450 PROTEIN 105 189 - -
Pste1g04219 206 Pfam RING-H2 zinc finger domain 109 138 IPR024766 GO:0008270
Pste1g04219 206 MobiDBLite consensus disorder prediction 148 166 - -
Pste1g04219 206 SUPERFAMILY RING/U-box 104 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04219 Pste-Chr1 26557376 26561386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04219 24 201 C3H Transcription Factor Family AT4G10150 44.724 5.97e-47 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04219 1 26557376 26561386 Pste1g04219 1 26557376 26561386 ECH