Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04191 CAACACTATCTCTCATTCAACTAAAACGCACCCTATTCTTCATCTTTGCATCGAATTTTTTCTTGAATTAACTTCTTGGTATTCTTCTGAGAGCTTCTTCTCTTCAGAGAGAGAGAGAGACAGAGAGAGGGATGGAAAGAATGTTCCCTCCAAAGAAACCTTCAACTATGAATTCCCATGACAGACCCATGTGTGTGCAAGGTGACTCAGGGCTTGTTCTCACCACAGACCCTAAGCCTCGCCTCCGTTGGACTGTTGAACTACATGAACGATTTGTTGATGCTGTTGCTCAGCTTGGAGGACCTGATAAGGCCACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTTAAGAGCCACCTTCAGAAATTCAGACTTGGAAAGCAGCCCCACAAGGATTTCAATGATCACTCGATTAAGGATAGCATGAGAGCTCATTCAGCTTTAGAACTTCAACGAAATATTGGCTCCTCTTCTGCCATGATTGGCCCCAACATGAACGAGATGCATTTGGAGGTGCAGAGAATATTGCATGAACAACTAGAGGTTCAAAAAAACCTTCAGCTAAGGATTGAGGCTCAAGGAAAATACATGCAAAGTATATTAGAGAAGGCTTATCACACCATTGCTGGAGAAAATATAGCCACAAACATGAAGGGTATGGGAGGTCTTCAAGGAACCACTGAAATAGGTGTCATGAAAGAATTTGGTTCCCTCAATTACCCTTCTTTTCATCAAGATCTCAACATTTATGTTAGTGACGGTGACCAATTTGATGGGTTTATGCAAACTAATAGTGAAGCTTTGTTTGAGGGGAAGAAGAGGCCTTGCCCCTATACTGGAAGTGGAAAGACTCAATTGCTTTGGAGTAATGATCTAAGGCTTCAAGATTTGGGAGCATCATGCATTGGTCCTCAAGATGACCCTTTTAAGGGTGATCACAAGGTTCACATTTCACAACCATCAATGGATAGTGATCCCATGTCAGAAATCTATGACACTAAGCCAGTGGTGCTCCATGGAGAAAATGTAGGTGATCAGAAGAAATTTGATGGGTCTATGAAGCTAGAGAGGTCATCACCAAAAAGATCACCACTTCATCATCCAGAAAGAACTGGTCCGATGATGAATGCTAGTTCCCTGGCACAAGGCAGAAGCTCCACATTTGGTTGAGAATTATAATTAGTTTGGTTAATTATGTAATTTACTAATTGAATGAGATATAGGGTTTTGAATTGGGTGTTATAGAG 1270 0.4173 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKDSMRAHSALELQRNIGSSSAMIGPNMNEMHLEVQRILHEQLEVQKNLQLRIEAQGKYMQSILEKAYHTIAGENIATNMKGMGGLQGTTEIGVMKEFGSLNYPSFHQDLNIYVSDGDQFDGFMQTNSEALFEGKKRPCPYTGSGKTQLLWSNDLRLQDLGASCIGPQDDPFKGDHKVHISQPSMDSDPMSEIYDTKPVVLHGENVGDQKKFDGSMKLERSSPKRSPLHHPERTGPMMNASSLAQGRSSTFG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04191 353 MobiDBLite consensus disorder prediction 339 353 - -
Pste1g04191 353 MobiDBLite consensus disorder prediction 1 20 - -
Pste1g04191 353 Gene3D - 34 92 - -
Pste1g04191 353 MobiDBLite consensus disorder prediction 268 291 - -
Pste1g04191 353 MobiDBLite consensus disorder prediction 306 353 - -
Pste1g04191 353 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Pste1g04191 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Pste1g04191 353 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 208 IPR044848 GO:0003700
Pste1g04191 353 Pfam MYB-CC type transfactor, LHEQLE motif 132 170 IPR025756 -
Pste1g04191 353 FunFam Myb family transcription factor 34 92 - -
Pste1g04191 353 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Pste1g04191 353 MobiDBLite consensus disorder prediction 306 332 - -
Pste1g04191 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04191 Pste-Chr1 26107229 26110569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04191 4 353 G2-like Transcription Factor Family AT1G79430 53.826 3.34e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g04191 Myb_DNA-binding 4.8e-07 CL0123