Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04178 AGTTATATAGAAATGCGAAACTAGTCCATGGCTTCCTTCAACGTTATCTACCTCTTTATCCTTCTTAGCTTCATCAATTTTGTCACTACTAAATCATATGGTAACCCTAGTTTTAGCTACTCTTGTTCACTTTCACCCAAAAATAAAACCACTCCAAACAGTGTCTTCCACTTAAACCTAAGGACTCTGCTATCTTACTTATCTTCCAACGCCACCACCAAGCAGTTCTATAATACTTCAGTTACCAGCAAAAGTCACTTCGACGCTGTATATGGAATATTCATGTGTTGGGGTGATGTTACACCTGAGCTTTGTACCCAGTGCGTCTCAAACGCAACCAAAGCAATATTAATCCCAGCTTCACCTGAAGGGGACGATGACAATTGCCTCTTGTCCAAAGAGGCAAGGTTTTTTAACGAAGTTTGCATGATTCGTTTTTCGAATCACTTTTTCTTTTCCATTGTTGACTTAGGTTCTCCTGAGAGCGAGTGCATATACAACAACCAGGAAAACTACACAAGTTTGGTTTACAAAGCGATTAATGAAACTGCGGATGATGCAGCAAGAATAGATGGATTTCAAACCCTTTATTGTGAAGCTCAGTGCACACCTGATCTATCACCTCAAGATTGTAGTAAATGTCTAAATATTGTTACCATATCTCATGGTCAAGGGAGTTGTCGTGGATTGTCAGGAAGTTTTAGAAATCCTAGTTGTAAAATCAAGTATGATGTTTACCCTTTCTATCGCCCTAGTATCACTCCAGCCCCATCTGAACTTGTTCCCATAAAAAATTCTTCTAGTACTAAACCAAAACACTCTCAACACAATGCTTATCTTTCCCATCATTGTTCAAAAAACAACACATTCAGCAACACATTGGCTTCAAATGTGAGGTCACTCCTCTCTTCCATGTCTTCTTATGATACCACTAAAAATGGTTTCTTTAAGACCACCATTAACACGGTTAGTGGCCTCTTCATGTGCCGCGGGAACCTTTCTGCTACCCTTTGTCACATATGTGTCCTAAATGCAACCCAATTTATATCCTCAGAGTGCCCTTTTTCTCAAGAGGCTATCATTTGGTACAATTACTGCTTCCTTCGCTATTCTAAAGGCCCATCTCTCTCCACAAATGACACAACACCTGTTTATCATGACCTCACTATTGTTAGCACTTCCAACCCTAACTTGCAACAAAGATTCCTCTCTTGGACTTTGGCAAATATTTTATATGAAATGCAATATAAGCCAGATGAGAGTACCATTAAGAATTATGGAACAAAAGCAGTAAAACTCAATGATCATCAAACCCTTCATACTCTTGTTCAGTGTACGCCAGATCTATCTTATAGTGATTGCGACAGTTGTCTACATAACATTGTCCAAAAGGAAATTCCATGGTACTTTTTGGCGAGTTTGGAGGGAAAAGTAATGTTTCCTAGCTGCTATATCATGTTTGGATTGTCTCAATTTTACGATAATGATAACGAAGTTGAGGCATCCGAGCACACTCCTCCTTCTCCTGCAAATACAGGTGATGTTCCCATTCAAGGCACGAACAACTATCATCTTAATTGTTGTCCTCATCATGGTTTTGGTGGTGCTATTTTTCTTTTGCTGCTATTTGCGAAGGAGAGAAACAAGGAAAAACAACTGCAAGACTCTTCTAAAAAAAAACTTTCTAAGCAAGGTTCAACTGAATTCAAGAATGAGATTTTATTAATAGCTAAGTTACAACACAGAAATCTTGTGACATTTATAGGATTTTGCTTGGAAGATCAAGAGAAAATTCTAATTTATGAATACATGCCAAATGGGAGTCTTGATTACCACTTATTTGATATTGAACATCAAAAGTTAAGTTGGTTGGAACGTTACAAAATTATAAAAGGAACTGCTATTGGAATTCTTTATTTACATGAATATTCTCGACTTAAAGTTATTCATCGTGATCTTAAACCTAGTAATGTTCTATTGGACGAAAATATGAATCCCAAAATATCAGATTTTGGTTTGGCCAAAATTGTTGAAATGGATCAAGATTGTGGAAATACTAACAAAATTGCTGGAACATTTGGTTATATGCCACCAGAATATGCTATGCTTGGACAATTTTCTGACAAGTCAGACGTTTTTAGTTTTGGTGTCATGGTTCTTGAAATTATGACAGGAAAAAGAAATGTTTGGAGACAATGGAAGAATCAAGAACCATTAAATATCTTGGATTCAAACATAAAAACAAGTTATTCACAAATGGAAGTTCTCAAATGCATCCATGTTAGTTTATTATGTGTTCAAGAAAATCCAAATGCTAGACCAACAATGGCCATGGTTATTTCATATCTTAATAACGACTCACTTGAATTGCCATCTCCACAAGAACCGGCATTCTTCTTGCATAGATCTAGAATGGATCGAGAGATAGTTATACAACAAGAATTAAGTCTCACTCAAGCTAACAATGGTTCTACACCTTTTTCTACCAATGAGATGTCTACTACTGATTTTTATCCCAGATAATTCATTACTCTCTTATTTTGTA 2545 0.3666 MASFNVIYLFILLSFINFVTTKSYGNPSFSYSCSLSPKNKTTPNSVFHLNLRTLLSYLSSNATTKQFYNTSVTSKSHFDAVYGIFMCWGDVTPELCTQCVSNATKAILIPASPEGDDDNCLLSKEARFFNEVCMIRFSNHFFFSIVDLGSPESECIYNNQENYTSLVYKAINETADDAARIDGFQTLYCEAQCTPDLSPQDCSKCLNIVTISHGQGSCRGLSGSFRNPSCKIKYDVYPFYRPSITPAPSELVPIKNSSSTKPKHSQHNAYLSHHCSKNNTFSNTLASNVRSLLSSMSSYDTTKNGFFKTTINTVSGLFMCRGNLSATLCHICVLNATQFISSECPFSQEAIIWYNYCFLRYSKGPSLSTNDTTPVYHDLTIVSTSNPNLQQRFLSWTLANILYEMQYKPDESTIKNYGTKAVKLNDHQTLHTLVQCTPDLSYSDCDSCLHNIVQKEIPWYFLASLEGKVMFPSCYIMFGLSQFYDNDNEVEASEHTPPSPANTGDVPIQGTNNYHLNCCPHHGFGGAIFLLLLFAKERNKEKQLQDSSKKKLSKQGSTEFKNEILLIAKLQHRNLVTFIGFCLEDQEKILIYEYMPNGSLDYHLFDIEHQKLSWLERYKIIKGTAIGILYLHEYSRLKVIHRDLKPSNVLLDENMNPKISDFGLAKIVEMDQDCGNTNKIAGTFGYMPPEYAMLGQFSDKSDVFSFGVMVLEIMTGKRNVWRQWKNQEPLNILDSNIKTSYSQMEVLKCIHVSLLCVQENPNARPTMAMVISYLNNDSLELPSPQEPAFFLHRSRMDREIVIQQELSLTQANNGSTPFSTNEMSTTDFYPR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04178 831 ProSiteProfiles Gnk2-homologous domain profile. 28 142 IPR002902 -
Pste1g04178 831 SMART serkin_6 532 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04178 831 FunFam Lectin-domain containing receptor kinase A4.3 595 791 - -
Pste1g04178 831 ProSiteProfiles Gnk2-homologous domain profile. 267 366 IPR002902 -
Pste1g04178 831 SUPERFAMILY Protein kinase-like (PK-like) 502 784 IPR011009 -
Pste1g04178 831 Gene3D - 29 142 IPR038408 -
Pste1g04178 831 Gene3D - 377 483 IPR038408 -
Pste1g04178 831 Gene3D - 267 365 IPR038408 -
Pste1g04178 831 Gene3D - 152 239 IPR038408 -
Pste1g04178 831 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 265 827 - -
Pste1g04178 831 ProSiteProfiles Protein kinase domain profile. 514 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04178 831 Gene3D Transferase(Phosphotransferase) domain 1 595 782 - -
Pste1g04178 831 ProSiteProfiles Gnk2-homologous domain profile. 375 483 IPR002902 -
Pste1g04178 831 Pfam Salt stress response/antifungal 398 478 IPR002902 -
Pste1g04178 831 Pfam Salt stress response/antifungal 277 363 IPR002902 -
Pste1g04178 831 Pfam Salt stress response/antifungal 33 139 IPR002902 -
Pste1g04178 831 Pfam Protein tyrosine and serine/threonine kinase 547 773 IPR001245 GO:0004672|GO:0006468
Pste1g04178 831 Gene3D Phosphorylase Kinase; domain 1 505 594 - -
Pste1g04178 831 MobiDBLite consensus disorder prediction 811 831 - -
Pste1g04178 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04178 Pste-Chr1 25870082 25876921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04178 288 831 Receptor kinase-like Gene Family AT4G04490 33.493 1.76e-103 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04178 PK_Tyr_Ser-Thr 3.4e-44 CL0016