Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04177 CAAATCCTTAGTTTCGAAATCATCAGAGTTTAGCTCAGTTGGTTGAATATTTAGCGTGAGTTATTATATATAAACCATCTGATATCTGTGTTAGATTCCCAGAGTTATTGACATATTCTTCTACTTGAAGATATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGTCTCCATGTGCTGCATGCAAGCTTCTTAGAAGGAGATGTGCACATGATTGTGTGTTTGCTCCTTATTTCCCTGCAGATGAGCCTCACAAGTTTGCAAGTGTGCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAATTACCAGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTATATGAAGCAAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATATCCTCTTTGCAGCAACAAGTTGATTCTCTACAAACCCAATTGGCACTTGCACAAGCAGAAGTTGTGCACATGAGAATGTGCCACGTGTCCACTTCCACTCACCATCAACACAAATCATTATTATTACCTCAAGCCTCCAATTCATCCTCAGAGAACTTGTCTCCATCAAGTAAACTTGCAAAGTCCCTTTTTGCCATGGACATGGTAGTTGACCAACCAAACATAGGAGAGTCCTTATGGTCATCC 654 0.419 MKEGGRKQGAMSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDSLQTQLALAQAEVVHMRMCHVSTSTHHQHKSLLLPQASNSSSENLSPSSKLAKSLFAMDMVVDQPNIGESLWSS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04177 174 Coils Coil 92 112 - -
Pste1g04177 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 140 - -
Pste1g04177 174 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Pste1g04177 174 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04177 Pste-Chr1 25863468 25867923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04177 1 173 AS2 family AT1G31320 67.630 2.41e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pste1g04177 LOB 9.9e-44 No_clan