Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04163 AAGGTTTATGCATTGAGCGTGGTGGGTGAAATTCCAGAAGAGCTATGGACTCTCACTTACCTTACAGAATTGGATCTTCGCCAGAATCGCTTGAATGGTTCTATACCTCCAGCTATTGGAAATCTAACTCGTATGGAATATTTAACCTTTGGCATCAATGCTTTGTCTGGGGAGATTCCAAAAGAGCTAGGAAATCTTGTAGAATTGAAATCGCTGAGTTTTTCGTCTAACAACTTCTCAGGTTCTCTCCCATCTCAACTTGGGAATCTGCTAAAATTAGAACAACTTTACTTGGGCAGTTCAGGTATTAGTGGTTCAATTCCAACCACATTTGAAAATTTGAAGAATCTAAAGATACTGAGGTTTCAGGGCAATTCTTTTGAAGGCCAAATTCCATTGTCATTTTCCAATTTGACTTCTTTGATAGAGTTGAGAATAACTGGTTTATTTAATGGAAGCTCTTCCCTAGCTTTCTTAAGGAATTTGAAGTCCTTGAATATCTTAGAACTGAGGAACAATAATATTTCCGATTCATTCCCATCCTTTATTGGAGAATTGCAAAACCTGACTCAGTTGGATTTAAGCTTCAATAATATCACAGGACAGATTCCAAACTCTATATTCAATTCGGGTTCACTTTCTTACTTGTTTCTTGGAAATAACAAACTCAATGGTACCCTACCTACTCAGAAAAGTGAGTCACTTCTTAACATAGATTTATCCTACAACGATATATCAGGAAACCTTCCTTCTTGGGTAAACCAACAAAATTTACAACTCAATTTAGTAGCCAACAACTTGACAATTGAGAGATCAAATAACAGGGGTTTGCCTTCTGGACTTGAATGTTTACAGAAAAATTTTCCTTGCAACCGTGGCATTGGAAGATATTATAACTTTGCAATAAAGTGTGGTGGTCCTCAAATTACATCCTCAGATGGAACAGTGTTTGAAATGGACAACGAAACACTTGGTCCAGCTACCTATTTTGTTACTGATACTAATAGATGGGGTGTTAGTAATGTCGGATTATTCACTGGAAGCAACAATCCTCAATACAAACGTTCTGTGTCTAATCAAATTACTGGTACTGAGGATTCAGAGCTGTTCCAAACAGCTCGACTCTCTGCTTTATCACTCAGATATTATGGTCTAGGGCTGGAAAATGGCTTCTACAACATTACCCTCCAATTTGCAGAAATAACTATTTTGGATAATTTTGAATGGAGAAGTCTTGGAAGAAGAATCTTTGATATTTATATTCAGGGAAATCTTGTTTTAAAGGATTTTAATATAAAGAAGGAGGCAGGGGGAAAGTCTTTTAGTGTTGTCCAAATGAAATTTAGGGTCGAAGTGTTAGAAAATTATCTTGAGATACATTTCATTTGGGCTGGAAAAGGGACTTGTTGCATACCAACTCAAGGTACTTATGGACCCTTGATTTCAGCCATTAGTGCTATCCCAGATTTTATACCCACTGTTAGTAACAAACCTCCAAGCAGTAAAAGGAATAAAACTGGTCTAATCGTGGGGATTGTTGTTGGTGTTGGAGTTGTATGCTTTCTATTGGTTCTTGCATTCTTCTATGTCAATTATAAACAAAAACGCCATGATAATGATGAAGAGCTTTTAGACATTGACACAAAGCCATACACTTTTAGTTATTCCGAGTTGAGGAATGCTACAGATGACTTCAATCTTAGTAACAAGCTTGGAGAGGGAGGTTTTGGACCAGTTCATAAGGGAACACTTAAGGATGGAAGAGAAATAGCAGTGAAACAATTATCTGTAAAATCCAATCAAGGAAAAAAACAGTTTGTAACAGAAATTGCCATTATCTCTGCAGTGCAACATCGTAATCTTGTCAAATTATATGGTTGCTGCATTGAAGGAAATAATAGAATTTTGGTCTATGAGTATCTTGAAAACAAGAGTCTTGATCAAGCCCTTTTTGGGAATAATCTAAGCCTTGATTGGTGTATACGCTATGATATATGCTTGGGTATAGCAAGAGGTTTAACCTATCTACATGAAGAGTCACAAATCCGTATTGTACACCGTGATGTGAAATCTAGTAATATTCTTCTTGATTATGAACTTATTCCTAAAATATCTGATTTTGGGTTGGCAAAATTATATGATGATAAAATGACCCATATAAGCACGCGTGTGGCTGGCACAATTGGATATCTTTCACCAGAATATGCCATGCGAGGACACCTAACCGAGAAAGTTGATGTCTTTTCCTTTGGTGTTGTGCTTTTGGAAATAGTTAGTGGAAGGCCAAATTCCGATTCAACTTTGGAAGGAGACAAGATATATCTTCTAGAATGGGCCTGGCATCTACATGAAAACAATAGTGTAACCGACATTGTAGATCCAAGATTATCTAATTTCAACGAGGAAGAAGTAAAAAGAATAGTGGAAATAGCTCTGTTGTGCACACAAACATCACCAATATTACGACCATCAATGTCTCGTGTGGTTGCAATGCTTAAAGGAGACATAGAAGTGAGCACTATAACATTAAGGCCTGGGTACTTGACTGATTGGAAGTTTGATGATGACACTAGCTTCATGACTGAGGTTGCAACCAAAGGATCAGACACAAGTTTTCACAATTCTTCATCAGGTATCAGCATAGTTGGTGGTGTATGTCACTCATCAATTGATGATGCTAAAGCTATCATTCGTGAGACTCTAAGTGGGGATAACTAAGAATTAGGGTTTTAGTGCTTTTGATATAGTGTAGTAGAACAATGGCATGGCAATGTACTATAAAAGTAGTCATTCCTTACTTTACTTTTACTTCTTTTTTAGCCCTATGTTGTCTTCTAAAGTAATTGTCCC 2850 0.3691 KVYALSVVGEIPEELWTLTYLTELDLRQNRLNGSIPPAIGNLTRMEYLTFGINALSGEIPKELGNLVELKSLSFSSNNFSGSLPSQLGNLLKLEQLYLGSSGISGSIPTTFENLKNLKILRFQGNSFEGQIPLSFSNLTSLIELRITGLFNGSSSLAFLRNLKSLNILELRNNNISDSFPSFIGELQNLTQLDLSFNNITGQIPNSIFNSGSLSYLFLGNNKLNGTLPTQKSESLLNIDLSYNDISGNLPSWVNQQNLQLNLVANNLTIERSNNRGLPSGLECLQKNFPCNRGIGRYYNFAIKCGGPQITSSDGTVFEMDNETLGPATYFVTDTNRWGVSNVGLFTGSNNPQYKRSVSNQITGTEDSELFQTARLSALSLRYYGLGLENGFYNITLQFAEITILDNFEWRSLGRRIFDIYIQGNLVLKDFNIKKEAGGKSFSVVQMKFRVEVLENYLEIHFIWAGKGTCCIPTQGTYGPLISAISAIPDFIPTVSNKPPSSKRNKTGLIVGIVVGVGVVCFLLVLAFFYVNYKQKRHDNDEELLDIDTKPYTFSYSELRNATDDFNLSNKLGEGGFGPVHKGTLKDGREIAVKQLSVKSNQGKKQFVTEIAIISAVQHRNLVKLYGCCIEGNNRILVYEYLENKSLDQALFGNNLSLDWCIRYDICLGIARGLTYLHEESQIRIVHRDVKSSNILLDYELIPKISDFGLAKLYDDKMTHISTRVAGTIGYLSPEYAMRGHLTEKVDVFSFGVVLLEIVSGRPNSDSTLEGDKIYLLEWAWHLHENNSVTDIVDPRLSNFNEEEVKRIVEIALLCTQTSPILRPSMSRVVAMLKGDIEVSTITLRPGYLTDWKFDDDTSFMTEVATKGSDTSFHNSSSGISIVGGVCHSSIDDAKAIIRETLSGDN 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04163 905 Gene3D Phosphorylase Kinase; domain 1 528 640 - -
Pste1g04163 905 FunFam Putative LRR receptor-like serine/threonine-protein kinase 641 844 - -
Pste1g04163 905 SUPERFAMILY L domain-like 10 266 - -
Pste1g04163 905 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Pste1g04163 905 ProSiteProfiles Protein kinase domain profile. 565 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04163 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 684 696 IPR008271 GO:0004672|GO:0006468
Pste1g04163 905 Gene3D - 297 488 - -
Pste1g04163 905 SUPERFAMILY Protein kinase-like (PK-like) 548 863 IPR011009 -
Pste1g04163 905 Gene3D Ribonuclease Inhibitor 4 154 IPR032675 -
Pste1g04163 905 Gene3D Ribonuclease Inhibitor 155 285 IPR032675 -
Pste1g04163 905 ProSiteProfiles Leucine-rich repeat profile. 188 210 IPR001611 GO:0005515
Pste1g04163 905 FunFam Leucine-rich repeat receptor-like protein kinase 297 488 - -
Pste1g04163 905 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 871 - -
Pste1g04163 905 FunFam Putative LRR receptor-like serine/threonine-protein kinase 152 275 - -
Pste1g04163 905 CDD STKc_IRAK 571 834 - -
Pste1g04163 905 Gene3D Transferase(Phosphotransferase) domain 1 641 841 - -
Pste1g04163 905 SMART LRR_typ_2 18 42 IPR003591 -
Pste1g04163 905 SMART LRR_typ_2 66 90 IPR003591 -
Pste1g04163 905 SMART LRR_typ_2 162 184 IPR003591 -
Pste1g04163 905 SMART LRR_typ_2 186 210 IPR003591 -
Pste1g04163 905 Pfam Malectin domain 299 484 IPR021720 -
Pste1g04163 905 Pfam Protein tyrosine and serine/threonine kinase 566 832 IPR001245 GO:0004672|GO:0006468
Pste1g04163 905 FunFam Leucine-rich repeat receptor protein kinase EMS1 11 110 - -
Pste1g04163 905 SMART serkin_6 565 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04163 905 FunFam Leucine-rich repeat receptor-like protein kinase 534 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04163 Pste-Chr1 25532919 25548413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04163 45 875 Receptor kinase-like Gene Family AT1G56120 60.210 0.0 1050
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04163 PK_Tyr_Ser-Thr 4.2e-47 CL0016