Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04155 ATGGCTCAGGGAAGAGGCTTCAGTGCAATAATGTCACTATTGTTATGTATGTTGGTGCTTTACTCTACGATGGCTCATGCAAACACCTATATTGTTGGGGATAAAGGTGGTTGGACCTTTAACACAGTCAATTGGCCTAAGGGAAAGAGTTTTAAGGCTGGTGATGTGCTAGTATTCAACTATGATCCTTCAGACCACAACACAGTGATAGTAGATAAGGCTGGATACGATTCATGCGTTGCTCCACAAGGATCAAAATCGTTTCAATCAGGGCATGATCAGATCCCACTTGCCAAAGGAACAACCTACTTCATCTGCACTTTTCCTGGTCATTGCCAGGCTGGGATGAAAATTGCAGTCACTGCTGCATGA 372 0.4382 MAQGRGFSAIMSLLLCMLVLYSTMAHANTYIVGDKGGWTFNTVNWPKGKSFKAGDVLVFNYDPSDHNTVIVDKAGYDSCVAPQGSKSFQSGHDQIPLAKGTTYFICTFPGHCQAGMKIAVTAA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04155 123 Gene3D - 26 123 IPR008972 -
Pste1g04155 123 ProSitePatterns Type-1 copper (blue) proteins signature. 100 116 IPR028871 -
Pste1g04155 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
Pste1g04155 123 Pfam Plastocyanin-like domain 38 116 IPR003245 GO:0009055
Pste1g04155 123 SUPERFAMILY Cupredoxins 29 122 IPR008972 -
Pste1g04155 123 PANTHER BLUE COPPER PROTEIN 24 121 IPR039391 GO:0009055
Pste1g04155 123 CDD Plantacyanin 29 122 IPR041844 -
Pste1g04155 123 FunFam basic blue protein-like 28 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04155 Pste-Chr1 25326276 25328112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04155 9 122 Phytocyanin Superfamily AT1G17800 40.000 1.34e-22 84.7