Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04148 CAAAATATGGAGCATAAAGCTTGTGAAAAAAAATGTTTTTTCACCTTCTTTCACGTTTTCAAATACCCTCTTGGAGATTAGGTTTTCCATATTGGAAGCATTGCTATGAAGCTTAAGCGAGAAAAAGTGTTTGCAGTGATGCACTTGTGGATATGGTGGAGTACTTGTATTCATGTTAAAGCAGTAAATGATAGTTTAAAGCCTGGTGATAGACTGAATGCTAGCGGCGGAACAACAAATCTATATTCCAAAAACGGCATATATCTTCTAACATTTCGTGCTGGCTTCTTGGGAATACTCAATGAAGTTACAAATGGGTATTATTTTGTTTGGATTGGTAATAAAAACCAACCGGTTGACTACAATTCCGCAGTTCTATCTCTAAGCCACTCTGGTGTGCTGAAAATAGAATCTCTTAATCATAAACCAATAATACTTTATTCACCACCTCAACCTATCCACAACACTGTGGCCACCTTGTTGAACACAGGCAACTTTGTGCTTCAACAACTTCACCGTAATGGCACTAACACCACCTTGTGGCAGAGTTTTGACTATCCCTCTAACACTTTGTTCCCCACCATGAAGTTAGGTATTAATCACAAAACAGGCCTTCACTGGTTTCTTGTTTCAATTACCCATAATTCAGTTTTGCCAGGTGCTTTTCATCTTGAATGGGAACCCATGGGACAAGAACTGGTCATAAGGAGACGTGGAATACTTTATTGGCGAAGCGGGAAGCTGAGGAACAATAGATTTGAGCACATTCCTGAGGACGCACAACGCATGTTGTACTACACCATAGTGTCTAATGTGGATGAAGACTCCTTCTCTTTCACAACTACAAATATCGAAGATACATGGTGGATTTCAAGCAATGGGCAATTAAGCAATTTTTACACAACTTTTGTATGGGCTGATTTGTGTTATGGATATAACGACGCTGATGGGTGTCAAAGATGGCAGGATATACCAATGTGTAGGAATCGTGGTGATGTGTTTCAGAGCATTACTGGCCATTTCAATTATGACTTTTGGAGTGAACCAAATACTACTTATTACGTGAGTGATTGCCGGGACATTTGCTGGAGCAACTGTAATTGCATTGGATTCAAAGAAAAGAATACTAATGGAACCGGATGTGTATTCTTGCATTCAGAGTCAAGTTATAATGTTCCAAGTGTTGGAGAAGACTTTTACCTGCTGGGGAACCTAACCCAGCATAGTGGCAACTCTACTACAAAGTCTCAAACTCCTGGTATAAAGTGGAAATGGATAAGTGCCGTGATAGCATGTTTTTTATTCATAATATGCCTATCCATTTTGGTCTTAGCATTAAAGAAACGAAAATATGCACTTCAAGAGAAGAAAAGGAAAGAAATGGTGATCGAGATACCTCCATCAACATCGTGTAACATGTCCTGTATCCTCGAAGATTTTCAAGATGATTTAGAAAAGGCACATTTGAAAGTATTCAATTATACATCAATTATCACAGCTACAAATGGGTTTTCGTCTGAAAATAAGTTAGGACAGGGTGGTTTTGGACCTGTTTATAAGGGAATTCTGCCAACAGGAGAAGAGGTCGCTGTAAAGAGACTTTCAAAAACTTCTGCACAAGGAACTATAGAGTTTAAAAATGAACTAACACTTATATGTGAACTTCAGCATATGAATCTTGTACAACTCCTCGGCTGTTGCATTCATGAAGAAGAGAAGATTCTAGTCTACGAATATATGCCAAACAAAAGCTTGGATTTTTATCTATTCGATTCTACTAGAAGCAAATTACTGGATTGGAAGAAGCGATTCAATATATTAGAAGGAATTTCTCAAGGATTACTCTATCTTCACAAATACTCAAGACTCAATATCATTCATAGAGACTTAAAAGCTAGTAACATTCTTCTTGATAAAAATATGAATCCAACAATTTCAGATTTTGGAATGGCAAGAATATTCATGGAACAGGAATCCGTATCAAATACCAACAAGATTGTTGGCACATATGGTTATATGTCTCCAGAATATGCAATGGAAGGAACTTTCTCTATAAAATCTGATGTTTACAGCTTTGGAGTGTTGTTGCTTGAAATTGTTAGTGGAAGAAGAAATACCAGCTTTTACGATCCTGATGGGCCAATGAATTTAATAGGACATGCATGGGAATTATGGAAGGAAGGTGTATGTCTACAACTAGTGGATCCATCACTAAATGAGTCATTTGATCCTGATGAAGTGCAAAGATGTATTCATGTTGGCCTCTTATGCGTGGAACATTATGCAAATGATCGGCCAACAATGTCTGACATTATATCAATGTTGACAAATAAGAGTGTAATAGTTTCTTTACCTCAAAGGCCAGCATTCTATGTTCAAAGAGATAACTATGATGAGAATTTATCTTCTAAAGTGGTGTATACCGCTTCTACAGATGAAATTACTACGTCCTTCATAACAGAATCAAAGTGA 2472 0.3738 MKLKREKVFAVMHLWIWWSTCIHVKAVNDSLKPGDRLNASGGTTNLYSKNGIYLLTFRAGFLGILNEVTNGYYFVWIGNKNQPVDYNSAVLSLSHSGVLKIESLNHKPIILYSPPQPIHNTVATLLNTGNFVLQQLHRNGTNTTLWQSFDYPSNTLFPTMKLGINHKTGLHWFLVSITHNSVLPGAFHLEWEPMGQELVIRRRGILYWRSGKLRNNRFEHIPEDAQRMLYYTIVSNVDEDSFSFTTTNIEDTWWISSNGQLSNFYTTFVWADLCYGYNDADGCQRWQDIPMCRNRGDVFQSITGHFNYDFWSEPNTTYYVSDCRDICWSNCNCIGFKEKNTNGTGCVFLHSESSYNVPSVGEDFYLLGNLTQHSGNSTTKSQTPGIKWKWISAVIACFLFIICLSILVLALKKRKYALQEKKRKEMVIEIPPSTSCNMSCILEDFQDDLEKAHLKVFNYTSIITATNGFSSENKLGQGGFGPVYKGILPTGEEVAVKRLSKTSAQGTIEFKNELTLICELQHMNLVQLLGCCIHEEEKILVYEYMPNKSLDFYLFDSTRSKLLDWKKRFNILEGISQGLLYLHKYSRLNIIHRDLKASNILLDKNMNPTISDFGMARIFMEQESVSNTNKIVGTYGYMSPEYAMEGTFSIKSDVYSFGVLLLEIVSGRRNTSFYDPDGPMNLIGHAWELWKEGVCLQLVDPSLNESFDPDEVQRCIHVGLLCVEHYANDRPTMSDIISMLTNKSVIVSLPQRPAFYVQRDNYDENLSSKVVYTASTDEITTSFITESK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04148 788 Pfam D-mannose binding lectin 75 176 IPR001480 -
Pste1g04148 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 590 602 IPR008271 GO:0004672|GO:0006468
Pste1g04148 788 Gene3D Phosphorylase Kinase; domain 1 437 544 - -
Pste1g04148 788 Gene3D - 22 149 IPR036426 -
Pste1g04148 788 SMART blect_4 28 152 IPR001480 -
Pste1g04148 788 Pfam PAN-like domain 292 351 IPR003609 -
Pste1g04148 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 435 544 - -
Pste1g04148 788 SUPERFAMILY Protein kinase-like (PK-like) 454 768 IPR011009 -
Pste1g04148 788 PIRSF SRK 262 787 IPR024171 GO:0004674
Pste1g04148 788 PIRSF SRK 1 274 IPR024171 GO:0004674
Pste1g04148 788 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 127 764 - -
Pste1g04148 788 SMART serkin_6 469 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04148 788 ProSiteProfiles Bulb-type lectin domain profile. 22 146 IPR001480 -
Pste1g04148 788 Pfam Protein tyrosine and serine/threonine kinase 472 740 IPR001245 GO:0004672|GO:0006468
Pste1g04148 788 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 545 748 - -
Pste1g04148 788 CDD STKc_IRAK 475 742 - -
Pste1g04148 788 ProSiteProfiles Protein kinase domain profile. 469 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04148 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 174 IPR036426 -
Pste1g04148 788 Gene3D Transferase(Phosphotransferase) domain 1 545 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04148 Pste-Chr1 25200392 25204314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04148 442 764 Receptor kinase-like Gene Family AT3G45860 56.615 3.17e-128 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04148 PK_Tyr_Ser-Thr 1.5e-48 CL0016