Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04147 ATGAAGCTTAAGCTAGAGAATTTGATGTACATGTGGTTATGGTGGAGTATTAATGTTCATTTTAAAGCAAAAAGTGACAGTTTAAAGCCTGGTGATAGACTGATTGATTCAAAACTATATTCTCAAAACCGCAGGTATTATCTAGCTTTCAATCAGACATCTGTTGGTAATGACTACTTGGTTGTATGGAATGAAAATATGGATGAGATAGTTTGGATCGGTAATGTAAACCAACCTGTTGACCCAAAATCAGCAGTTCTATCACTAAACCAATCTGGTGTGCTGAAAATAGAATCTCAAAGGGGGAAGCCAATAATCCTGTATTCTCCACCTCAACCTATCAACAACACTGTGGCCACATTGTTGGACACAGGAAACTTTGCGCTTCAACAGTTTCACTCCAATGGCACAAACACCACATTGTGGCAGAGTTTTGACTATCCCTATGACATTTTGCTCCCCACCATGAAGTTAGGTGTTAACCACAAAACAGGCCATAATTGGTTTCTTGTTTCATATTTTACTGTTTCAGTAATAAGTCCTGGTTCCTTTAGTCTTGAATGGGAACCTATTGGACAAGAACTGGTCATAAGGAGAAGTGGACAAGTTAGTTGGCGCAGTGGGAAACTAAGGAACAATAGATTTGAGCAAATTCCGGAGGATGCACAACAGATGTTGAACTACACAGTTGTCTCAAACGGGGATGAGAACTCCTTCTCTTTCACAACTACAAATGATGAAGATGTTGGATTGTTGATTTCAAATACTGGGAATATAAAAAATTATAACATAACTATTGTACGGGCTGATATGTGTTATGGATATAATAATCATGGAGGGTGCCAAACATGGCAGGAGATTCCTAAATGTAGGAATCCTGGTGATTTGTTTGAGGGCATTAATGGTCACTTCAATTATGATTTATGGAGTGAAACAAATACCAATTATCGAACAAGTGATTGCCAAGACATTTGTTGGAGCAATTGTAGCTGCACAGGTTTCAAAGAACTCTTTCCTAATGGAACTGGATGTACATTCTTTTCAGAGGGAGTTTATACTCCTGGCAGTGATGGAGAACAGTTTTACATTTTAAAAAACCAAGTCCCGAATATTGACAACCATTCTTCAAAGTCACAAAGTCCTGGTACAATAAAGTGGATATGGATAAGTGCGGTAATAGCATGTTCTCTATTGACAATATGCTTATCAGTTGTGTGCTTTTCCTTAAAGAAACTAAAATATGCACTTCAAGAGAAGAAAGGGAAAGAAATGATGATGGAGATACCAACTTCAAAATGTAATGAGTCATTGACTATCGAAGGTTTTGAAGACGATATAGAAAAGGGACATTTAAAAGTATTCACATATACATCAATTATGATGGCTACAAATGGGTTCTCATCTGAAAATAAGTTAGGACAAGGAGGTTTTGGGCCGGTTTATAAGGGAATTTTACTGACCGGACAAGAGATTGCTGTAAAAAGACTTTCAAAAACATCCGCACAAGGAAATGTGGAGTTTAAAAATGAGGTAACACTTATATGTGAACTTCAGCACATGAATCTTGTCCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAGTATATGCCAAACAAAAGCTTGGATTTTCATCTATTCGATTCTACTAGAAGCAAATTACTAGATTGGAAGACACGCTTTAACATAGTAGAAGGAATTTCTCAAGGATTGCTTTATCTTCACAAGTACTCAAGACTAAAAGTCATTCACAGAGACTTAAAAGCTAGTAACATTCTTCTGGATGAAAATATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATGTTCACGCAACAAGAATCTGTATCAAATACCAGTAGGATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCTATGGAGGGCGCTTTCTCAACAAAATCTGATGTCTTCAGCTTTGGAGTATTGTTACTTGAAATTGTTAGTGGAAGAAGAAATACTAGCTTTTATGATGTTGATCATCCATTAAATCTAATAGGACATGCTTGGGAGTTATGGAAAGGTGGTGTATGTCTAGAGTTAGCTGATCCATCACTAAATGAGTCATTTGATCCCGATGAAGTGCAAAGATGCATTCATGTTGGTCTCTTGTGCGTGGAACATTATGCAAATGATCGACCAACAATGTCTGAAATTGTATCAATGTTGACAAACAAGAGCACAATAGCTTCCTTACCTCGAGGACCAGCATTCTATGTTCAAAGAAATATCTTTGATGGGAAATTATCTTCTAGAGAGTTGTATAGTACTACAGATGAAATTACTGCTTCTATGGAAACATATTCAAAGTGA 2355 0.3673 MKLKLENLMYMWLWWSINVHFKAKSDSLKPGDRLIDSKLYSQNRRYYLAFNQTSVGNDYLVVWNENMDEIVWIGNVNQPVDPKSAVLSLNQSGVLKIESQRGKPIILYSPPQPINNTVATLLDTGNFALQQFHSNGTNTTLWQSFDYPYDILLPTMKLGVNHKTGHNWFLVSYFTVSVISPGSFSLEWEPIGQELVIRRSGQVSWRSGKLRNNRFEQIPEDAQQMLNYTVVSNGDENSFSFTTTNDEDVGLLISNTGNIKNYNITIVRADMCYGYNNHGGCQTWQEIPKCRNPGDLFEGINGHFNYDLWSETNTNYRTSDCQDICWSNCSCTGFKELFPNGTGCTFFSEGVYTPGSDGEQFYILKNQVPNIDNHSSKSQSPGTIKWIWISAVIACSLLTICLSVVCFSLKKLKYALQEKKGKEMMMEIPTSKCNESLTIEGFEDDIEKGHLKVFTYTSIMMATNGFSSENKLGQGGFGPVYKGILLTGQEIAVKRLSKTSAQGNVEFKNEVTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFHLFDSTRSKLLDWKTRFNIVEGISQGLLYLHKYSRLKVIHRDLKASNILLDENMNPKISDFGMARMFTQQESVSNTSRIVGTYGYMSPEYAMEGAFSTKSDVFSFGVLLLEIVSGRRNTSFYDVDHPLNLIGHAWELWKGGVCLELADPSLNESFDPDEVQRCIHVGLLCVEHYANDRPTMSEIVSMLTNKSTIASLPRGPAFYVQRNIFDGKLSSRELYSTTDEITASMETYSK 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04147 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Pste1g04147 784 Gene3D Transferase(Phosphotransferase) domain 1 542 746 - -
Pste1g04147 784 SUPERFAMILY Protein kinase-like (PK-like) 451 753 IPR011009 -
Pste1g04147 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 170 IPR036426 -
Pste1g04147 784 Gene3D Phosphorylase Kinase; domain 1 430 541 - -
Pste1g04147 784 PIRSF SRK 3 271 IPR024171 GO:0004674
Pste1g04147 784 PIRSF SRK 267 783 IPR024171 GO:0004674
Pste1g04147 784 Gene3D - 20 145 IPR036426 -
Pste1g04147 784 Pfam Protein tyrosine and serine/threonine kinase 469 737 IPR001245 GO:0004672|GO:0006468
Pste1g04147 784 ProSiteProfiles Bulb-type lectin domain profile. 25 142 IPR001480 -
Pste1g04147 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 431 541 - -
Pste1g04147 784 SMART blect_4 25 148 IPR001480 -
Pste1g04147 784 Pfam D-mannose binding lectin 70 172 IPR001480 -
Pste1g04147 784 ProSiteProfiles Protein kinase domain profile. 466 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04147 784 SMART serkin_6 466 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04147 784 CDD STKc_IRAK 472 739 - -
Pste1g04147 784 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 773 - -
Pste1g04147 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 542 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04147 Pste-Chr1 25186190 25189814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04147 444 752 Receptor kinase-like Gene Family AT4G11530 57.742 2.35e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04147 PK_Tyr_Ser-Thr 5.8e-48 CL0016