Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04146 CGTAAAACACTCCAAGATGGTTTGTTCTAAACAGAGTCATCTCTTGCTTGTTTTCAAATACTCATGGTTGTGGTGGGTTACTTGTATTAGCGTTAATGCTGCAAATCACACTTTGAAGCCGGGAGATACACTGAATACAACAGACGAGCTATGTTCAGAAAACAGTAAATACTGTATTAAATTCTACCAAATGAATCCTGGTGTAAACTACACTTTCTTGACCATTAATGACAATGGAAAAGATAATGCAGCAGTAGTTTGGGTTGCTAATAGAGATCAGCGTATTGTTGACAAGGATTCAGCAGTTCTGGTGCTAGACAAAAGTGGTGTACTGAAAATTGAATCCAACAATGGGGTATCCATAATCCTTTACTCTTCGCCTCAACCATCCAACAACACTGTGGCATCGTTGATGAACACTGGCAATTTTGTGTTGCAACAACTTCACCCTAATGGAACAAAGAGTGTGTTATGGCAAAGTTTTGATTATCCTACTGATACTTTGCTCCCTGGGATGAAGTTAGGAGTCAATCACAAAACCAGTCATAATTGGTCGCTAGTTTCATGGTTGGGTTTACTCAACGCAAGATTCGGGGCATTTAGCCTTGAATGGGAACCCATAACAAGAGAATTGATTATCAAGCGAAGAGGACAATTGTGTTGGAAAAGTGGTGAACTGAGAGACAATGATGGATCCATGCACAACACACAGTACAAGATTGTCTCGAACGAAAACGAAAGCTACTTCGAAATTACATCTTCAAACGATGAACTTACAAAATGGGTGCTGTTGGAAACTGGGCAAGTGATAAATCGGAAAGGAGATGATAATGTAGCAAGGGCTGATATGTGTTATGGGTTCAACACAGATGAAGGGTGCCAAAAATGGGAGGAGTTACCCTCTTGCAGGAATCGTGGTGATGCGTTTGAAGCTAGGGAAGTTTATGTCAATTCGAATCTGAAAACCTATCTGGCTAATACGACTTATGGCACGAGTGATTGCAGGGATATTTGCTGGAAAAATTGCAGTTGTGATGGATATACAAGATATTATACTGGAGGAACTGGTTGTGTATTCTTGCATTGGAATTCAACTGATGGTGCTAATTTTGCAAGTGGGGGTGAAATGTTTTACATATTGGTAAAGAACACCTATCACAAAGGTACAAACAAGTGGATATGGATAACTATCGTAGCAATAGTTGTTCTACTTGTGATATGTGCTTTTATTCTTATCCTGACCTTTAAGAAGAGAAAACATATGTTTCAAGACAAGAAAAGAAAAGAACTGAAGACTAGGATGCTAGATTCAACAATCAAATATCTTGAAGATGAGTTCAAGAACAAACAAGATCTAAAAGTGTTTAAGTATACCTCAATTTTATCGGCAACTAATGATTTTTCGCCAGAAAACTTGTTAGGACAAGGAGGCTTTGGACCAGTTTATAAGGGAATCCTACCGAGTGGGCAAGAAGCTGCCATAAAAAGACTTTCTAAAACATCTAGACAAGGAATTGTGGAATTCAAAAATGAACTAATGCTTATATGTGAACTTCAGCACACGAATCTTGTACAATTACTTGGATGTTGCATTCATGAAGATGAGAGGATTCTAATTTATGAATATATGCCAAACAAAAGCTTGGATCTCTATCTTTTCGGTTGTAGTAGAACCAAGTTTCTTGATTGGAAGAAGCGTTTCAATATCATAGAAGGAATTGCTCAAGGTATACTCTATATTCATAAGTACTCAAGAGTCAAAGTTATTCACCGGGACTTAAAAGCTAGTAATGTACTTCTAGATGAGAATATGAAACCAAAGATTTCTGATTTTGGACTAGCAAGAATGTTTGCAGAACAACAATCCACAACAAATACTAGTAGGATTGTCGGCACATATGGTTACATGTCTCCAGAATATGCCATGGAAGGAATTTTCTCCATCAAATCTGATGTTTATAGCTTTGGAGTCTTGATCCTTGAAATAGTTAGTGGAAGAAGAAATACTAGCTTCTATGATGTCAACCACCCTATAAATTTGATAGGATATGCTTGGGAGTTATGGAATCAAGGTGTTCCTCTACAGTTAATGGATTCATTACTTAATGATTCCTTTGATCCTAATGAAGTGAAAAGATGCATTCACATTGGTCTCTTATGCATAGAACAATCTGCTGATGATCGACCTACAATGTCTCATATAGTTTCAATGTTAACAAATGAAAGTGCAATAGTTGCCTTGCCTCAAAGACCAGCATTCTATGTGGAAAGAAAAAAGTTTGAATGGGAAACAACTTCCAAAGAGTTTAGAACAACCACCACAGAAGAAATTACTGCTTCCTCAGAAATA 2350 0.3745 MVCSKQSHLLLVFKYSWLWWVTCISVNAANHTLKPGDTLNTTDELCSENSKYCIKFYQMNPGVNYTFLTINDNGKDNAAVVWVANRDQRIVDKDSAVLVLDKSGVLKIESNNGVSIILYSSPQPSNNTVASLMNTGNFVLQQLHPNGTKSVLWQSFDYPTDTLLPGMKLGVNHKTSHNWSLVSWLGLLNARFGAFSLEWEPITRELIIKRRGQLCWKSGELRDNDGSMHNTQYKIVSNENESYFEITSSNDELTKWVLLETGQVINRKGDDNVARADMCYGFNTDEGCQKWEELPSCRNRGDAFEAREVYVNSNLKTYLANTTYGTSDCRDICWKNCSCDGYTRYYTGGTGCVFLHWNSTDGANFASGGEMFYILVKNTYHKGTNKWIWITIVAIVVLLVICAFILILTFKKRKHMFQDKKRKELKTRMLDSTIKYLEDEFKNKQDLKVFKYTSILSATNDFSPENLLGQGGFGPVYKGILPSGQEAAIKRLSKTSRQGIVEFKNELMLICELQHTNLVQLLGCCIHEDERILIYEYMPNKSLDLYLFGCSRTKFLDWKKRFNIIEGIAQGILYIHKYSRVKVIHRDLKASNVLLDENMKPKISDFGLARMFAEQQSTTNTSRIVGTYGYMSPEYAMEGIFSIKSDVYSFGVLILEIVSGRRNTSFYDVNHPINLIGYAWELWNQGVPLQLMDSLLNDSFDPNEVKRCIHIGLLCIEQSADDRPTMSHIVSMLTNESAIVALPQRPAFYVERKKFEWETTSKEFRTTTTEEITASSEI 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04146 778 CDD STKc_IRAK 468 735 - -
Pste1g04146 778 SUPERFAMILY Protein kinase-like (PK-like) 447 761 IPR011009 -
Pste1g04146 778 Gene3D Phosphorylase Kinase; domain 1 422 537 - -
Pste1g04146 778 SMART blect_4 36 159 IPR001480 -
Pste1g04146 778 ProSiteProfiles Protein kinase domain profile. 462 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04146 778 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 758 - -
Pste1g04146 778 PIRSF SRK 268 777 IPR024171 GO:0004674
Pste1g04146 778 PIRSF SRK 3 280 IPR024171 GO:0004674
Pste1g04146 778 Gene3D Transferase(Phosphotransferase) domain 1 538 742 - -
Pste1g04146 778 SMART serkin_6 462 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04146 778 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 427 537 - -
Pste1g04146 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Pste1g04146 778 Pfam PAN-like domain 297 356 IPR003609 -
Pste1g04146 778 Pfam Protein tyrosine and serine/threonine kinase 466 733 IPR001245 GO:0004672|GO:0006468
Pste1g04146 778 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 184 IPR036426 -
Pste1g04146 778 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 538 741 - -
Pste1g04146 778 Gene3D - 24 156 IPR036426 -
Pste1g04146 778 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Pste1g04146 778 Pfam D-mannose binding lectin 80 184 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04146 Pste-Chr1 25153598 25156799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04146 450 756 Receptor kinase-like Gene Family AT3G45860 57.605 2.90e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04146 PK_Tyr_Ser-Thr 2.2e-47 CL0016