Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04142 TACCAAGGGAAGCCTCATTTCTTTCTTTTTCTCACGTTCTTGTGGTTGTGGTTGATTACTTCTATCCACGTTGACGCCAGAGATAGTTTGAAGCCAGGTGAATCACTGAATTCCACAGAAGCAACAGAGCTATGCTCAAAAAATGGTAATTATTGCATGAGTTTTAACCTAATAAATCCCGATAATGGTGGATCTTACTTGAATATATATGCCCAAAAGAAGGATAATTGGGTAGTGTGGGTTGCTAATAGGAACCAACCTGTGGAATCAAATTCTGCAGTTCTTTCATTGAACCATTTTGGAGTACTCAAAATTGAATCTGAAGATGGGAAGAAAGAGCCAATAGTTCTTCATTCTCCACCTCAAGCCATGAACAACACTGTGGCCACTTTGTTGGACACAGGAAACTTTGTGCTTCAACAACTTCACCCCAATGGGTCAACAATTAGTGTGTTGTGGCAAAGTTTTGATTTTCCCACTGACACTTTGCTCCCAGGGATGAAGTTAGGTGTGAATCCCAAACCTGGTGGAAATGGAAATACTAATTGGTCACTGGTTTCATGGGTGAGTAAAAATGTTCCTACTCCTGGTCCATTCAAACTTGAATGGGAATCAAAATCAAAACAATTGATCATCAAGAAAAGAGAAAAAGTTTATTGGGAAAGTGGGAATGAGTTAGAGCACATTTCAAGTGAGATTGAGCATGAGATTGTCCCAGATGAAAGTGGAGACTTCTTCACATTGAAAAGTTCAGAAGAGCTTACAATATGGACACTTTTGTCAACTGGGCAATTGATAAACAGAAAAGGAGTTGATGTTGCAAGGGCCAACATGTGTTATGGTGACAACAGTGATGGAGGGTGCAAAAAGTGGGAGGAGAGACCCTATTGCAGGAACCCTGGTGATGTGTTTCAGAATGTGCAAGTTTACCTCAATAGGGAGATGAGAAGTTTTATAAAGAATTCAAGTTATGGCATAAGTGATTGCCAGGAAATTTGTTGGCAAAATTGCAGCTGCATTGGATTCACTTATTATTATGATCTAGATGAAACTGGATGCATCTTTCTAAGGGATTCAATGAAGGGTACCAATATTGCAAGCGAGGGTGATAAATTTTACATGTTGGTAAAGAGCAACCCTAGACGTATAGCAAAGTGGATATGGGCAATTGTTGCAATAGGAGCAACTATACTCATAATCTGCTTTGTCATTCTCTGCAGAATCTTCATGAAACGAAAATATGTGTATGAAGAGAATAATGAAGCTATCAGTAGATCCTCTAGCACCAGAAAACTAGAAATTGTTTTAAAGGAGGAACATAACTTGAAAGTTTTTAGTTATGCATCAATAATGGAGGCTACAAATGACTTTTCATCTGAAAACAAGTTAGGTCAAGGAGGTTTTGGACTAGTTTACAAGGGAACTCTGTCTACAAGACAAGAAGTTGCTGTGAAAAAACTTTCAAAATCTTCTCGACAAGGACTTATCGAATTTAAAAATGAATCAACAGTCATATCTAAACTCCAGCACACAAATTTGGTACAGCTGCTTGGTTATTGCATCCATGAAGAAGAACGGATCTTGATCTATGAGTATATGTCTAACAAAAGCTTGGATTTCATTTTATTTGATTCTACTCAAGGTCACATGTTGGATTGGAATAAGCGTTTTCACATAATAGAAGGAATTGCTCAAGGATTACTCTACCTTCACAAATACTCAAGACTTAGAATCATTCATAGAGACCTAAAGACTAGTAACATACTACTTGACGAGAATATGATTCCCAAAATTTCTGATTTTGGGATAGCAAAAATGTTCACACTAAAAGATTCTCAAGCAAATACGAACAGGATTATTGGGACATATGGTTACATGTCGCCTGAATATGCAATGGAAGGAATTTTCTCTACAAAATCTGATGTATACAGCTTTGGAGTGTTACTCTTTGAAATTGTTAGCGGTAAAAGAAACAATAGTTTATACACTGAAGAACGACAACTCAATTTAGTAGGACACGCATGGGAACTATGGAAAGAAGGTGAGGCTCTTAAATTGGTGGATCCATCACTAAACAATTCATTTTCAGAGGATGAAGTGCTAAGATGTGTTCATGCTGGTCTATTATGTGTGGAAGAAATTGCAGATGATCGTCCCTCCATGTCCAACATTGTATCCATGTTAACAAACGAAAGTAAATTGACTTCTGTGCCTAAAAAACCAGCATATTATGTTAGAACAAACCTTCTTGGGGAAGAAACGTCTACTAAAGATTTTGGTTTGGATTCCTTATACGAAAATTCCCTT 2307 0.3745 YQGKPHFFLFLTFLWLWLITSIHVDARDSLKPGESLNSTEATELCSKNGNYCMSFNLINPDNGGSYLNIYAQKKDNWVVWVANRNQPVESNSAVLSLNHFGVLKIESEDGKKEPIVLHSPPQAMNNTVATLLDTGNFVLQQLHPNGSTISVLWQSFDFPTDTLLPGMKLGVNPKPGGNGNTNWSLVSWVSKNVPTPGPFKLEWESKSKQLIIKKREKVYWESGNELEHISSEIEHEIVPDESGDFFTLKSSEELTIWTLLSTGQLINRKGVDVARANMCYGDNSDGGCKKWEERPYCRNPGDVFQNVQVYLNREMRSFIKNSSYGISDCQEICWQNCSCIGFTYYYDLDETGCIFLRDSMKGTNIASEGDKFYMLVKSNPRRIAKWIWAIVAIGATILIICFVILCRIFMKRKYVYEENNEAISRSSSTRKLEIVLKEEHNLKVFSYASIMEATNDFSSENKLGQGGFGLVYKGTLSTRQEVAVKKLSKSSRQGLIEFKNESTVISKLQHTNLVQLLGYCIHEEERILIYEYMSNKSLDFILFDSTQGHMLDWNKRFHIIEGIAQGLLYLHKYSRLRIIHRDLKTSNILLDENMIPKISDFGIAKMFTLKDSQANTNRIIGTYGYMSPEYAMEGIFSTKSDVYSFGVLLFEIVSGKRNNSLYTEERQLNLVGHAWELWKEGEALKLVDPSLNNSFSEDEVLRCVHAGLLCVEEIADDRPSMSNIVSMLTNESKLTSVPKKPAYYVRTNLLGEETSTKDFGLDSLYENSL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04142 769 ProSiteProfiles PAN/Apple domain profile. 297 379 IPR003609 -
Pste1g04142 769 SMART serkin_6 457 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04142 769 SMART blect_4 27 159 IPR001480 -
Pste1g04142 769 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 184 IPR036426 -
Pste1g04142 769 Gene3D Transferase(Phosphotransferase) domain 1 533 742 - -
Pste1g04142 769 Pfam PAN-like domain 297 355 IPR003609 -
Pste1g04142 769 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 130 744 - -
Pste1g04142 769 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 421 532 - -
Pste1g04142 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Pste1g04142 769 ProSiteProfiles Bulb-type lectin domain profile. 27 152 IPR001480 -
Pste1g04142 769 ProSiteProfiles Protein kinase domain profile. 457 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04142 769 Pfam D-mannose binding lectin 78 188 IPR001480 -
Pste1g04142 769 PIRSF SRK 269 767 IPR024171 GO:0004674
Pste1g04142 769 PIRSF SRK 4 268 IPR024171 GO:0004674
Pste1g04142 769 Pfam Protein tyrosine and serine/threonine kinase 460 727 IPR001245 GO:0004672|GO:0006468
Pste1g04142 769 Gene3D Phosphorylase Kinase; domain 1 417 532 - -
Pste1g04142 769 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase CES101 isoform A 21 156 - -
Pste1g04142 769 CDD STKc_IRAK 463 730 - -
Pste1g04142 769 Gene3D - 21 156 IPR036426 -
Pste1g04142 769 SUPERFAMILY Protein kinase-like (PK-like) 440 744 IPR011009 -
Pste1g04142 769 ProSitePatterns Protein kinases ATP-binding region signature. 463 486 IPR017441 GO:0005524
Pste1g04142 769 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 533 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04142 Pste-Chr1 25073861 25078420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04142 447 758 Receptor kinase-like Gene Family AT4G23150 57.278 3.32e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04142 PK_Tyr_Ser-Thr 2.7e-49 CL0016