Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04131 GGAGGTGCAGAAGTAGGGGGCAGAGGGGAAGAGAGGCATGGTGGAACGAAAGCAAAAGTAGTGAATAAGGAGGTCATCCAGGAACTCAAGGGTGTTACGTGGGACGAGTCAAATCCACTAAAGTTATTTATACCTTGTAGGATCATTTGTGCATCAAAGCGGAAAGAATCAAAATTAACTATAATAGATCTGGAAAATCCATCTAATCTTGATTTGGCTATTAATGTGGGAACTAATGATGGTTTTAATTTCCTTGGTGATGTTAAGGGTGGTGTGGAGGGTTTTGAAATATGTCCTGATTTTATTATGTTGGATGAGAAGTGTGGAGAAGTTAAGTACGGGGGGCATGCAACTGGCATTGGGATACTTAATTCTAATCCCGTATCTCGTCATGATGGTGCCAATTCCACTTCTCTTCATCGTGGTTATCGGATGCCTAAATCCAATTCTCTTTATTATTATGAGACAGGGCATGTTGCTGGCTATGGGGCAGGGAATTGTTTAGAAGCCACCACGAAGGCAAAGGACAATAAGCTACATCATGAAGAAATTGAAAAAGTTGCTGAAGAAGTGACAAAAATATTGGGTCGCAATCAATTGGTTAGCTTTGGGGATGATTTAGTTGATATGTACACTCGTGAAGCCAAAAATCTTGAAGCAATAGTTATGGGAGAACAATATCCAAATCAAGAGTCTCTAGAAACTACCATGAGGGTCAACGCTCTATCAAAAATGAATCATCTTAAGTTTCTCATCATTAATTATCTTTCTAAAGAATTAAGATATCTAAATTGGGAAAAATATCCATTCGAGTATTTGCCATCAAGTTTTCTTCCAGATCAACCTGTGGAGTTGATCCTGCCTTATAGCAATATCAAACAATTATGGGAAGGCACAAAGCGCTTGCCTAATTTGAGAAATCTAGATCTCAGTCACTCCAAAAATCTTATTGAAATGCCAGACTTAAGAGGGTTCCCACATCTTGTGTGTCTTACTCTTGAAGGATGTGCAGAAATTTTGAAGATCCATCCATCCATTAGCATGCTGAGAGAGCTTACTCATTTGAATTTGGGAGATTGCAAAAATCTTGTAGTTAATCTGAATGTCATTTCTGGGATTAGTTCTCTTACGCATTTAAATCTCAAAGGCTGTTCAAGATTACTTAACACTGAGCTGTCACCATCAATAAGGAAAAAAAAGCATTTGGAAAAAGTTAACAAAAATAAAAGTGCCATCAAATTATCAACATCTTCTGTACACAACAAAAAACCTGAAGATTCATTTGGTTTGTTGTTGCCTTATTTGTCTAATTTTCAATTATATAATCTTGATCTGAGCTTCTGCAAACTACTTCGAATCCCTGAAACTATTGGGGACTTGCATTCTTTAGAACACTTAAATTTGGGGGGAGACAAATTTGTGACACTACCTACTACCATCAAGCAACTGTCCAAACTTCGAATTTTGAATTTGGAGCACTGCAAGCGGTTGAAATATTTGCCTAACCTTGCAAGAAAAGAAAATACAATTGACAAAGGTTTCAGTGCATTGTATGTTTTTGATTGCCCCAATTTGAGTGATGTGGAGCACTGTTATAGAGTGGCTTTTTCTTGGATGATGCAAAACCTTGAGGTATACATGCAATCCTCTCTTTTGAATGGTAGTGCTAATATTGTTACTCCTGAAACTCAAATTCCAAGATGGTTCAGTGAACAAAATGAGGGTAGTTCAATAAGCATGGACATGTCTACCGTTATGGAAGATCCAACTTGGATAGGTGTTGTTTGTTGTGCAGTATTTGTGGCACATAATGATCCAACTACATTGAGTAAAAAGAAGGATCTTTATGCAAATATTGGATTTGGGGTTAGAAATAAACTGAATAATGGTCGGATTTCTTCAATGTCTCCAATACTTTTTGACAGAGAACTTGTCACAGTTGACTTTTATCACTTGTTAATAAATCTTTTCACTCGTGAAACCATCATTCATCTTGTAAGTGAATCTTCAAATGGAATGTTAGATCATGATCATATGGAATTTGCATCATTCATTCACCACCCTCCAGGCTTGCATTTGGAGGTGAAAAGTTGTGGTTATTGTTGGTTATTTGAGGAGGATCTTCAACAA 2130 0.3718 GGAEVGGRGEERHGGTKAKVVNKEVIQELKGVTWDESNPLKLFIPCRIICASKRKESKLTIIDLENPSNLDLAINVGTNDGFNFLGDVKGGVEGFEICPDFIMLDEKCGEVKYGGHATGIGILNSNPVSRHDGANSTSLHRGYRMPKSNSLYYYETGHVAGYGAGNCLEATTKAKDNKLHHEEIEKVAEEVTKILGRNQLVSFGDDLVDMYTREAKNLEAIVMGEQYPNQESLETTMRVNALSKMNHLKFLIINYLSKELRYLNWEKYPFEYLPSSFLPDQPVELILPYSNIKQLWEGTKRLPNLRNLDLSHSKNLIEMPDLRGFPHLVCLTLEGCAEILKIHPSISMLRELTHLNLGDCKNLVVNLNVISGISSLTHLNLKGCSRLLNTELSPSIRKKKHLEKVNKNKSAIKLSTSSVHNKKPEDSFGLLLPYLSNFQLYNLDLSFCKLLRIPETIGDLHSLEHLNLGGDKFVTLPTTIKQLSKLRILNLEHCKRLKYLPNLARKENTIDKGFSALYVFDCPNLSDVEHCYRVAFSWMMQNLEVYMQSSLLNGSANIVTPETQIPRWFSEQNEGSSISMDMSTVMEDPTWIGVVCCAVFVAHNDPTTLSKKKDLYANIGFGVRNKLNNGRISSMSPILFDRELVTVDFYHLLINLFTRETIIHLVSESSNGMLDHDHMEFASFIHHPPGLHLEVKSCGYCWLFEEDLQQ 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04131 710 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 401 515 IPR044974 GO:0006952
Pste1g04131 710 Pfam Leucine Rich Repeat 283 300 IPR011713 -
Pste1g04131 710 Pfam Leucine rich repeat 439 495 IPR001611 GO:0005515
Pste1g04131 710 SUPERFAMILY L domain-like 246 508 - -
Pste1g04131 710 Gene3D Ribonuclease Inhibitor 166 573 IPR032675 -
Pste1g04131 710 Pfam C-JID domain 561 708 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04131 Pste-Chr1 24792205 24806226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04131 253 506 WRKY Transcription Factor Family AT4G12020 32.576 1.37e-21 99.0