Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04126 ATTATTGTTCTGAGGGTCTATCAAGTTCATATCATGGGATGGTGCATATCACATGGCTTGGTTTTTGCACTTGTGGCTGTGTTCTGTGTCTTCATTTGCTTGGTTCATGTTTCACAAGCTCAATCTGCAAACGCCACCACTGATCCTTCTGAAGTTAGCATTGGAAGAGCCATTGATGATACAGCCATTGATAATCCAAATATTAACCCATTCATCAAATGTGATTGTTCCTATGATAATAGAAATACTTGTCACATCACAGCATTGAAGATTTATGCAATGGATGTGGTTGGTGAAATCCATGAAGAGCTATGGACTCTCACTTACCTTACCAATTTGACCATTGGCGTCAATAACTTATCAGGGGAGCTTCCAAAGGAATTGGGAAATCTTACAGAGTTGAAGTTACTCTACTTTGATAGTTCAGGAATTAGTGGTCCAATTCCTTCCACATTTGCAGACCTTAGAAATCTGGTGACAGTATGGGCTTCAGATACAGAACTCACAGGCAATATACCAGAGTTCATAGGAAGTTGGCCTAAGCTTCGATCCTTGAGGTTTCAAGGAAATTCTTTTAATGGCTCAATACCCTCGTCATTTTCCAATTTGACTTCTTTGACAGAATTGAGAATAAGTGGTTTGTCTAATGGGAGCTCCTCATTGGAATTTGTCAAGAATATGAAATCTCTAACTATATTAGAATTGAGAAATAACAATATTTTTGGTCCTATTCCATCCACTATAGGAGAGTTTCAAAATTTGACTCAATTGGATTTAAGCTTCAATAACATCATCAGACAAATTCTTGAATCAATTTTCAGTTTGAGTTCACTCTCTCACTTGTTTCTTGGAAATAATAAACTTAATGGTACCCTTCCAATGCACAAAAGTTCATCTCTTCAAAATATAGACTTATCATACAATGATTTATCTGGTAGTCTCCCCTCTTGGATAAACGAACCAAATTTACAACTGAATTTAGTCGCCATCAACTTAACAATAGATAGTTCAAGTTCCAGTGGTTTGCCTATTGGGCTTAACTGTCTCCAGAAAAATTTTCCTTGCAATCGAGATTTTAACTTCGCAATCAAGTGTGGTGGTCCTGAAATTAGGTCAACAGATGGAATTGTGTTTGAAATGGACAATGCAACACTCGGTCCTGCTACATATTTTGTTACTGATACAAATAGATGGGCTGTTAGTAATGTTGGACTATTTACGGGAAGCAATAATCATGTATACAAAAGTTTTGTGTCTAATCAGTTCACTGGCACTTTGAATTCAGAGTTATTCCAAACAGCAAGACTATCTGCTTCGTCACTAAAATATTATGGCTTGGGGCTAGAAAATGGCTTTTACAACATCACTCTTCAATTTGCAGAAACAATTATTCAGGATGCTAACATTACTACATGGAAAAGCCTTGGAAGGAGGGTATTTGATATTTATATCCAGGGGATTCTTGCATTAAAGGATTTTGACATACAAAAGGAAGCAAGGGGTTTTTCATATAGTGTTGTTCAAAAGAAATTTAGGTTTGAAGTAACACAAAACTATTTGGAGATCCATTTTTTTTGGGCTGGGAAAGGGACTTGTTGTATACCATCTCAAGGTACTTATGGACCCTTGATTCAAGCCATCCATGCTATCCCAGAGCTTTTAGGAATTGATACAAAGCCATATACGTTCAGCTATTCAGAGTTAAAGAATGCTACAAATGATTTTAGTATTGAAAATAAACTTGGAGAAGGAGGTTTTGGATCTGTTTATAAGGGTAATGGTACACTTAATGATGGAAGAACCATTGCTGTGAAACAATTGTCAATAGGATCCCATCAAGGAAAAAATGAGTTTGTAACTGAGATTGCTACTATATCAGCTGTACAACATCGAAATTTGGTCAAATTATACGGATGTTGTATTGAGGGGCATAAAATACTTTTGGTCTATGAGTATCTAGAAAAAAAGAGTCTTGATCAAGCATTATTTGGAAAAGGTTTAATCTTGAATTGGCCTACACGCTATGATATTTGCTTGGGTGTTGCTAAAGGTTTAGCTTATTTACATAAGGAGTCACGTCTTCGAGTTATACATCGTGATGTGAAGGCCAGTAATATTTTGCTTGATTATGAGCTTAATCCTAAAATATCTGATTTTGGGTTAGCCAAATTGTATGACAATAAACAAACCCACATAAGCACTCGTGTGGCGGGTACAATTGGATATCTTGCACCTGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATATATTTTCCTTTGGTGTCGTGGCTCTAGAGTTAGTTAGTGGAAGGCCAAATGCTGATTCAAGTTTGGAAGCTGAGAAGATGTATCTTCTAGAATGGGCATGGAAGCTTCATGAAAGAAACTGCATAATTGATTTAGTGGATTCTAGACTTTCAGAATTCAACCAGGAAGAAGTAAAACGTGTTGTAGGAATAGCACTTTTGTGCACTCAGACATCACCAACATTAAGACCATCAATGTCACGTGTGGTTGCAATGCTTTCAGGAGATATTGAAGTGAGCATTGTACCTACAAAGCCAGGATACCTAACGGATTGGAAAATTGAGGATTTGATGACTAACTTGATCACTGACACTACAATTGAAGCATCAATTACTGGATATGATAATTCATCAATAAATCTTAGACTTTCAGAATTCAACAAAGAAGTAAAACGCGTTGTAGGAATAGTGTTTTTGTGCACCCAAGCATCACCAGCATTACGACCATTGATGTCACGTGTGTGGTGGCAATCTGGGTACCTGACAGATTGGAACTTTGAGAATGTGAGCAGCTTCATGACTGAGATAATAATGAAAGGATCATATACAAGTTATGACAATTCACAAGCAAATACTAGCATAGTGGCTGGTGCAGACCAATCACCAACAAGTGCTTATAAACCAATCTTGGATAAGACTGTA 2955 0.3709 IIVLRVYQVHIMGWCISHGLVFALVAVFCVFICLVHVSQAQSANATTDPSEVSIGRAIDDTAIDNPNINPFIKCDCSYDNRNTCHITALKIYAMDVVGEIHEELWTLTYLTNLTIGVNNLSGELPKELGNLTELKLLYFDSSGISGPIPSTFADLRNLVTVWASDTELTGNIPEFIGSWPKLRSLRFQGNSFNGSIPSSFSNLTSLTELRISGLSNGSSSLEFVKNMKSLTILELRNNNIFGPIPSTIGEFQNLTQLDLSFNNIIRQILESIFSLSSLSHLFLGNNKLNGTLPMHKSSSLQNIDLSYNDLSGSLPSWINEPNLQLNLVAINLTIDSSSSSGLPIGLNCLQKNFPCNRDFNFAIKCGGPEIRSTDGIVFEMDNATLGPATYFVTDTNRWAVSNVGLFTGSNNHVYKSFVSNQFTGTLNSELFQTARLSASSLKYYGLGLENGFYNITLQFAETIIQDANITTWKSLGRRVFDIYIQGILALKDFDIQKEARGFSYSVVQKKFRFEVTQNYLEIHFFWAGKGTCCIPSQGTYGPLIQAIHAIPELLGIDTKPYTFSYSELKNATNDFSIENKLGEGGFGSVYKGNGTLNDGRTIAVKQLSIGSHQGKNEFVTEIATISAVQHRNLVKLYGCCIEGHKILLVYEYLEKKSLDQALFGKGLILNWPTRYDICLGVAKGLAYLHKESRLRVIHRDVKASNILLDYELNPKISDFGLAKLYDNKQTHISTRVAGTIGYLAPEYAMRGHLTEKADIFSFGVVALELVSGRPNADSSLEAEKMYLLEWAWKLHERNCIIDLVDSRLSEFNQEEVKRVVGIALLCTQTSPTLRPSMSRVVAMLSGDIEVSIVPTKPGYLTDWKIEDLMTNLITDTTIEASITGYDNSSINLRLSEFNKEVKRVVGIVFLCTQASPALRPLMSRVWWQSGYLTDWNFENVSSFMTEIIMKGSYTSYDNSQANTSIVAGADQSPTSAYKPILDKTV 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04126 985 FunFam Leucine-rich repeat receptor-like protein kinase 358 551 - -
Pste1g04126 985 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 110 869 - -
Pste1g04126 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase 653 856 - -
Pste1g04126 985 SUPERFAMILY Protein kinase-like (PK-like) 558 880 IPR011009 -
Pste1g04126 985 Gene3D Phosphorylase Kinase; domain 1 549 652 - -
Pste1g04126 985 Pfam Malectin domain 361 547 IPR021720 -
Pste1g04126 985 Gene3D Ribonuclease Inhibitor 217 350 IPR032675 -
Pste1g04126 985 Gene3D Ribonuclease Inhibitor 77 216 IPR032675 -
Pste1g04126 985 Pfam Protein tyrosine and serine/threonine kinase 576 844 IPR001245 GO:0004672|GO:0006468
Pste1g04126 985 ProSiteProfiles Protein kinase domain profile. 575 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04126 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Pste1g04126 985 CDD STKc_IRAK 581 844 - -
Pste1g04126 985 SUPERFAMILY L domain-like 78 325 - -
Pste1g04126 985 FunFam Leucine-rich repeat receptor-like protein kinase 547 652 - -
Pste1g04126 985 Gene3D Transferase(Phosphotransferase) domain 1 653 852 - -
Pste1g04126 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase 217 340 - -
Pste1g04126 985 SMART serkin_6 575 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04126 985 Gene3D - 356 548 - -
Pste1g04126 985 ProSitePatterns Protein kinases ATP-binding region signature. 581 605 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04126 Pste-Chr1 24600122 24623905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04126 890 942 Receptor kinase-like Gene Family AT1G56120 46.269 2.25e-07 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04126 PK_Tyr_Ser-Thr 9e-47 CL0016