Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04119 ATGACACAAACGTATCAGCTCAAGAAGGTCCATTTCTTTCTCCAATTCCATGATTTGGATATTGAAGAGTTGGAATTTTTCACTGAGTATGGGGATGCCAATAGATACAAGATTCTTGAGCTTGTAGGGAAGGGAAGTTATGGAGTTGTATGTGCAGCAATTGACACATACACTGGGGAAAAGGTTGCTATAAAGAAGATTCAAGACATCTTTGACCATACCTCTGATGCCATTAGAATCCTCCGTGAAGTTAAGTTGTTAAGGCTACTAAGACACCCTGATATTGTTGAGATTAAAAGGATTATGTTGCCATCTTCAAAAAGAGAGTTTAATGATATTTATGTGGTCCTTGAGCTCATGGAGTGTGATCTCCATCAAGTTATCAAAGCTAATGATGACTTAACTCATGAACATTATCAGTTTTTTCTTTATCAAATGTTACGTGCATTGAAGTATACACACTCAGCTAATGTGTATCATAGAGATCTGAAGCCCAGAAATATATTGGCAAATGCAAATTGCAAAATCAAAGTTTGTGATTTTGGACTAGCAAGAGTTGCATTCAATGATTCACCAATACCATTATTTTGGACAGATTACGTGGCTACAAGATGGTACAGAGCCCCAGAGTTGTGTGGATCATTCTTGTCTAAGTATACACCATCAATTGATATATGGAGTATTGGATGTATATTTGCTGAACTACTACTTGGAAAACCATTGTTTCCTGGAAAAAATGTTGCGCATCAACTAGATTTGATTACAAATCTTCTTGGGACACCATCTATTGAAACAATTAAAAGAGTTCGAAATGATAATGCAAGGAAGTACTTGATGAGAATGCAGAATAAACCACCTGTGTCATTTGAACAAAAATTTCCAAATGTTGATCCATTGGCACTTCGTCTTCTACAAAAACTTCTAGCATTTGATCCAATAGATCGACCAACTGCTCAAGATGCTTTAAATGATCCTTACTTCAAAGGCTTAGCCAAAGTTGAGAGAGAACCATCACGTAAACCGATTTCAAGATTGGAATTTGAGTTTGAGAAGAGAAGGATGACAAAAGAGGATGTTAGAGAACTATTATATCGAGAAATATTAGAATATCATCCCGAACTTCTTAAAGATTACGTAAATAAAGCTAGAGGTGCAAACTTCCTATATCCTAGTGCAATGTATCAATTGAGAAAGCAATTTGTTTATCTTGAGGAAAACAATGGTAAAAGTGCACCCATGCCTTTTCCACCACAAAGGAAACATTTCTCTCTTCCAAGACCCACTATTTATTCTAGTACAGCTCCTCCTAATTCCCAAGCAACCCTTTTGTGTGAGAATGAGAAAATTATAAAAGATGACTATAAAAGTTCAAAAGATGCCGTGCCAATTATTGCAAATAAATTAAAGGGTTTACAATCTCAACCACAAGTGTCAACAGGTAAAATAGAGATAGTAGTAAGCCCAATTCCAAAGTATGAAGATAAAAAAAACATACAAAACACTAATACCCCA 1512 0.3565 MTQTYQLKKVHFFLQFHDLDIEELEFFTEYGDANRYKILELVGKGSYGVVCAAIDTYTGEKVAIKKIQDIFDHTSDAIRILREVKLLRLLRHPDIVEIKRIMLPSSKREFNDIYVVLELMECDLHQVIKANDDLTHEHYQFFLYQMLRALKYTHSANVYHRDLKPRNILANANCKIKVCDFGLARVAFNDSPIPLFWTDYVATRWYRAPELCGSFLSKYTPSIDIWSIGCIFAELLLGKPLFPGKNVAHQLDLITNLLGTPSIETIKRVRNDNARKYLMRMQNKPPVSFEQKFPNVDPLALRLLQKLLAFDPIDRPTAQDALNDPYFKGLAKVEREPSRKPISRLEFEFEKRRMTKEDVRELLYREILEYHPELLKDYVNKARGANFLYPSAMYQLRKQFVYLEENNGKSAPMPFPPQRKHFSLPRPTIYSSTAPPNSQATLLCENEKIIKDDYKSSKDAVPIIANKLKGLQSQPQVSTGKIEIVVSPIPKYEDKKNIQNTNTP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04119 504 FunFam Mitogen-activated protein kinase 122 350 - -
Pste1g04119 504 Gene3D Transferase(Phosphotransferase) domain 1 122 350 - -
Pste1g04119 504 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 35 356 - -
Pste1g04119 504 CDD STKc_TDY_MAPK 35 372 - -
Pste1g04119 504 ProSitePatterns MAP kinase signature. 71 174 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pste1g04119 504 ProSiteProfiles Protein kinase domain profile. 36 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04119 504 Gene3D Phosphorylase Kinase; domain 1 51 373 - -
Pste1g04119 504 FunFam Mitogen-activated protein kinase 26 129 - -
Pste1g04119 504 SUPERFAMILY Protein kinase-like (PK-like) 31 331 IPR011009 -
Pste1g04119 504 Pfam Protein kinase domain 36 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04119 504 ProSitePatterns Protein kinases ATP-binding region signature. 42 66 IPR017441 GO:0005524
Pste1g04119 504 SMART serkin_6 36 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04119 Pste-Chr1 24462826 24468186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04119 23 434 MAP Kinase Gene Family AT2G42880 76.214 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pste1g04119 Pkinase 2.3e-65 CL0016