Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04108 ATTCTGCAAACTCCCCACTCTCTCATCCCCACCTCTTCATGCACAGCTGTTAATTCGCTGTCCAAACACTTCCCAACGATTTCGCGGACACGATTCTCTGTCTCTCTGCTGCTTCTCCTCCACGCTACTTCTCGAGAAAACACGCGTATGCCTGGGAACAACTACGCCACCGCCAACGGCAGCAGCCACATTCCGGATCGCGTGGGGCGGCTCCTCCGCGACCGGGAGCTGAGGAAGAGCGGCTGGGCAAGCCGTCTCAACGACGCCGCCGAGAGCAATGGCAGCGGTGGCGGCGAAGCATACGACCACGAGAAGGCGCGGCTGAGAGAGGAGGAGTACGCCGGTGATGTCGCCGTCGTCGAAGGCGGTGATGCGGCGGCGGCGGTAGCGGAGGAACTGCCAGAGGCTAAACCGTTTCGGCAGCGGCTTCTGGTGGTAGCGAACCGGTTACCGGTGTCGGCGGTGAGGAAAGGAGAGGACGCGTGGTCGTTGGAGATCAGCGCCGGTGGCCTCGTCAGCGCGCTGTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGAGTGAACGTGCCTGATGAGATTGGACAGAAAGCACTTACTAAAGCCTTGGCAGAAAAGAGGTGCATCCCTGTATTCCTTGATGAAGAGATAGTTCATCAATATTACAATGGCTATTGCAACAACATATTGTGGCCACTTTTCCACTACCTTGGACTTCCACAAGAGGATCGTCTTGCCACCACACGCAGTTTTCAGTCTCAGTTTGAAGCATATGAGAAAGCAAATCAGATGTTTGCTGATGTTGTGAACAAGCACTATGAAGAGGGTGATGTAGTTTGGTGCCATGATTACCATCTCATGTTCCTTCCAAAATGCTTAAAGAAGCATAACAAAAAAATGAAAGTTGGATGGTTTCTCCACACTCCTTTTCCTTCTTCTGAAATTCACAGAACACTACCATCTCGTTCTGAGCTTTTGCATTCTGTTCTTGCTGCTGATTTAGTTGGTTTTCACACCTACGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAAGGTACACCTTATGGGGTTGAGTATCAAGGGAAGCTAACTAGAGTTGCTGCTTTTCCAATTGGGATAGACTCCGAACGATTTATACGTGCTCTTGACCTTCCTCCAGTACAGGAACACATCAAAGAATTACAAGAAAGATTTAAAGGAAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAAAACGCTAATTGGCGTGATAAAGTTGTTTTGCTTCAAATTGCTGTCCCGACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGTCAAGTTCATGAAATAGTTGGTCGCATCAATGGCAGATTTGGAACATTGACTGCTGTTCCTATACACCACTTGGATCGCTCACTTGACTTTCACGCACTATGTGCTCTGTATGCTGTTACTGGTGCAGCACAATCTCTTGGTGCCGGGGCTATTCTTGTTAACCCCTGGAATATTACAGAAGTTGCTGCTGCAATAGCTAGGGCTCTGAATATGTCACCTGCTGAAAGAGAAAAGAGACATAAACATAATTTTTTTCATGTAAAATCGCACACTGCTCAAGAATGGGCAGCAACATTCGTAAGTGAGCTAAATGATACTGTTATTGAGGCACAACTGAGGACAAGACAAGTTCCGCCACGGCTTCCAACAAAAACTGCAATTGAACGTTATCAGCAGTCAACTAATCGATTGCTCATTTTGGGATTTAGTGGAACTTTAACTGAACCCGTCGAGAAAACAGGTGATCAGATTAAAGAAATGGAACTTAAGGTACATCCAAAATTGAGACAACCCTTGACAGCACTATGCAGAGATCCAAATACCACAGTTGTTGTGCTCAGTGGAAGTGGTAGACAAGTCCTAGATGATAACTTCAAAGAATATAACATGTGGTTGGCAGCTGAGAATGGAATGTTTTTACAACCTTCAAAGGGTGAGTGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGCATGTTTTTGAGTACTTCACAGAAAGAACACCTCGGTCACATTTTGTTTTTGAAGAAAGGGAAACTTCCCTTGTATGGAATTACAAATATTCAGATATTGAGTTTGGAAAACTTCAAGCAAGGGACATGTTGCAGCATCTATGGACAGGTCCAATTTCTAATGCATCAGTTGAAGTTGTTCAAGGGAGTCGATCTGTTGAGGTTCGAGCTGTTGGTGTTACAAAGGGAGCAGCCATTGACCGCATCTTGGGTGAGATTGTGCACAGTAAAGCTATGACATCACCAATTGATTATGTTCTTTGCATAGGACATTTTCTAGGGAAGGATGAAGATCTTTATTCATTTTTTGAGCCTGATCTTCCTTCCATTGGTGTGGGTTTTCCACGAAGCAAAGTAACAACAGATGGAGTCAAGTTTCCGGTAGAGAGAAAACCATCTTTGAAGGCCCCAGCTGCAACCAAGAGTGGACCAAGGCCATCTCAAAACAAGGCACAAAGAGCAGTGTCAAGCTCTGAGAAGAAAACAAACAACCATATATGCAGTACACCACGAAAATCAGCACCAGAAAAGGTATCATGGAATGTCCTTGACCTTAACAAAGAGAACTACTTCTCTTGTACTGTTGGAAGAACAAGAACAAATGCTCGCTACATTCTTGATTCATCAGATGATGTCGTTTCGTTTCTGAAGGAGCTAGCTGGTGCTTCTTCTCGTATTTACTACTGAGTCAAAATACTTCAACAAAGGGAGGATTTAGGGCAATCACTTTTTCATGCATTATACATGAAGAGTGGTAGCAACACATTTTCTAACATGTTTTTATAATACTTTTTTTTTGTGTTTGTTCTCATTTAGTACAATCCTGAATGAAATTTTCAAACAAATTAGTCTTAATGATTCTGCCATTGTGCAAATTCAACCTAAAACACTTTGAAAAGCATTCTAAAACACTTTATAAGTATTATATATCTAAAGTTTTAGAGGCCAACTTGGACGATGGAAGAATCATTAGAGATTAATTTGTCCGAAAATTTCTTTAAGTATCAATGAATATAACTCTAAAGATCAAAATGGATATTTACTCCTTTCTAATTATTATAATTTGTAAGTTTAGAAAAGAAATTTATTAAGTAAGATGTAATACTTATAATTTTTTGTTCTTTCCCATAGATTTTAATCAATAAAAAATGTGTATTTAAAAGAATATGTTTCTAGCATATTTTTTTTCATAGTACTTATAATTTTTGCATGCATGAATATGTGAAAAGAGTGAATCTAATTAAAATTGACCCAACCTTCACTCCCATATGTACTTCTAACTTACACAAGTGTGTAAAGGAGAATAA 3443 0.4174 ILQTPHSLIPTSSCTAVNSLSKHFPTISRTRFSVSLLLLLHATSRENTRMPGNNYATANGSSHIPDRVGRLLRDRELRKSGWASRLNDAAESNGSGGGEAYDHEKARLREEEYAGDVAVVEGGDAAAAVAEELPEAKPFRQRLLVVANRLPVSAVRKGEDAWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKKHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTGAAQSLGAGAILVNPWNITEVAAAIARALNMSPAEREKRHKHNFFHVKSHTAQEWAATFVSELNDTVIEAQLRTRQVPPRLPTKTAIERYQQSTNRLLILGFSGTLTEPVEKTGDQIKEMELKVHPKLRQPLTALCRDPNTTVVVLSGSGRQVLDDNFKEYNMWLAAENGMFLQPSKGEWMTTMPEHLNMEWHVFEYFTERTPRSHFVFEERETSLVWNYKYSDIEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKAMTSPIDYVLCIGHFLGKDEDLYSFFEPDLPSIGVGFPRSKVTTDGVKFPVERKPSLKAPAATKSGPRPSQNKAQRAVSSSEKKTNNHICSTPRKSAPEKVSWNVLDLNKENYFSCTVGRTRTNARYILDSSDDVVSFLKELAGASSRIYY 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04108 940 Gene3D Glycogen Phosphorylase B; 135 388 - -
Pste1g04108 940 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 136 506 IPR001830 GO:0003824|GO:0005992
Pste1g04108 940 CDD GT20_TPS 142 571 IPR001830 GO:0003824|GO:0005992
Pste1g04108 940 Gene3D Glycogen Phosphorylase B; 507 556 - -
Pste1g04108 940 CDD HAD_TPP 604 825 - -
Pste1g04108 940 Gene3D - 607 825 IPR023214 -
Pste1g04108 940 Pfam Trehalose-phosphatase 625 828 IPR003337 GO:0003824|GO:0005992
Pste1g04108 940 Gene3D Glycogen Phosphorylase B; 557 568 - -
Pste1g04108 940 Gene3D Glycogen Phosphorylase B; 389 506 - -
Pste1g04108 940 Gene3D - 692 770 - -
Pste1g04108 940 Pfam Glycosyltransferase family 20 507 571 IPR001830 GO:0003824|GO:0005992
Pste1g04108 940 Pfam Glycosyltransferase family 20 142 506 IPR001830 GO:0003824|GO:0005992
Pste1g04108 940 FunFam Alpha,alpha-trehalose-phosphate synthase 627 695 - -
Pste1g04108 940 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 693 770 - -
Pste1g04108 940 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 141 573 - -
Pste1g04108 940 MobiDBLite consensus disorder prediction 842 884 - -
Pste1g04108 940 MobiDBLite consensus disorder prediction 854 882 - -
Pste1g04108 940 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 134 388 - -
Pste1g04108 940 SUPERFAMILY HAD-like 603 932 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04108 Pste-Chr1 24308100 24332067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04108 50 936 Trehalose Biosynthesis Gene Families AT1G78580 72.526 0.0 1355