Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04104 AAATGGATATTCTCCTTCTTCTACTTCTTATTTGCAAGCTATTATTTTCTCTCTTCTCTCAAATTAGCTATGCAAGTGACACCATCACTTTGCTTAACCCACTTCATGATAATGGTAGCACCTTGGTTTCCCAAGGGGGAACCTTTGAGTTAGGCTTTTTCAGTTCTGGAAGTTCCGGTAACCGCTATGTTGGAATTTGGTACAAAAATATTGTTGTGAGAACTGTGGTTTGGGTGGCCAATCGCGACCATCCGGTGAAAGACAACTCTAGCCGGATGGTCGTCCAGCAAGACGAAAGTCTTGTACTGATTGGTCAAAATCAGAGTCAAATTCTATGGTCGACAAATGTGTCGACCAAGGTTTCAAACCCATTTGTCCAGCTCGTGGACAACGGAAACTTGGTGATCCAAGATGGTGACGACAACAAAGATGATACTTTTTTGTGGCAAAGTTTTGATTATCCTTGTGATACATTGTTGCAGGGAATGAAGCTAGGGTGGGACTCAAAAACAGGGCTTAACCGGCGTCTTATTGCTTGGAAAAGTTGGGATGATCCATCTTCAGGGGATTTTACATGGGGAGTTGAATTAGGAAGCAACCCTGATATTGTTATGTGGAAAGGTAATGTTGAGTACTTTAGGACTGGACCTTATACTGGGAATATGTTTAATGGTGTATATGGGCCTACGAATAACCCACTCTATTATTACACGTTTTTTAATACCAAAGATGAAGTGTATTTTCAATACACCCTAAGGAATAGTTCGGTTATTACTATAATTGTTATGAATCAAACACTTTATCTTCGTAATCGTTTAACTTGGATTCCGGAAGCCAAAACTTGGACTATTTACCAATCCTTGCCACGAGATAGTTGTGATGTTTACAACACTTGTGGGCCCAATGGAAATTGTGTGATTGCTGGGTCACCAATTTGTGAGTGCTTAGAGGGGTTTGTGCCAAAATCGCCACAACAATGGAATGCAATGGATTGGAGAGAAGGGTGTGTGAGAAGTGAAGATTGGAGTTGTGGGGTCAAAGATAAAGATGGGTTTCGAAAGTTTGGTAGTATGAAATTGCCAAATACTACACATTCTTGGGTTAATCAAAGTATGACACTTGAGGAGTGTAAGAGCAAATGTTTGAAAAATTGTTCTTGCACGGCTTATTCCAATTTGGACACAAGGGATGGTGGTAGTGGCTGTTCCATTTGGGGTGGTGATCTTTATGATTTGAGAGTTATTGAAAGTGGCCAAGATTTGTATTCACTTTATGGTTCATTTCTTTGTCAACCTATGCATGTAGATGGTAAACATGGGAAACGAAAAAAGATAATCTTGGCTACTTCTGTCATAGCATCGTTGTTACTGGTGATGTTATTGGCATTCTGCATTTACATGACTAGAAAAAGATATAAAGGAAAAACAAAACCAAGAATACCGATGGAGGATAAAGACAAATGCAAACAAGAGGATTTGGAGCTTCCTTTTTTTTATCTTGTTACAATAGTTGATGCCACTAACAATTTTTCAATTGAGAATAAACTAGGTGAAGGTGGTTTTGGTCCTGTATATAAGGGTATATTGGTAGACGGACAAGAAATTGCAATCAAAAGACTTTCAAGAAGTTCGGGACAAGGATTGAAAGAGTTTAGGAATGAAGTTATACTGTGTGCTAAACTTCAACACCGTAATCTTGTTAAGGTTATAGGTTATTGCATGGAAGGAGATGAGAAAATGTTACTTTATGAATACATGCCTAACAAAAGTCTCGACTTGTTTCTTTTTGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATACACAGAGATCTGAAAGCAAGTAATATTTTATTAGACAATTATATGAATCCAAAAATTTCAGATTTTGGCCTTGCTAGAATGTGTGGAAGTGATCAGGCTGAAGGTAGTACAAGCATTATAGTTGGGACACATGGTTACATGGCACCTGAATATGCAATTGATGGATTATTCTCTACCAAATCGGATGTCTTTAGCTTTGGAGTATTATTACTAGAAATTGTCAGTGGAAAGAAAAACAGAGTATTTACCTATCAAGCCCACAACCATAATCTTATTGACCATGCATGGAGATTGTGGAAAGAGGGTACACCTGAGAAATTGATTGATGCTTGTTTAGAAAACTCATGCAACATATTTGAAGTTATACGTTTCATCCAAATTAGTCTTCTATGTTTACAACATCATCCTGATGATAGACCAAACATGACATCAGTTATTGTGATGTTGACTAGTGAAAATGTTTTGCCTGAACCTAAGGAGCCTGGTTTCCTAATTAGAAAGTTCTCAAAAGAAGGAGAACAATCTTCTAACAAACAAACATGTTCATCAATTAATGAAGTAACTGTATCACTTTTAGATGCTAGATAAAAAATATTAAGTTATTTTTAATTTATATTAAATTATGTAAATATACTTGCAGATTGAAATGTTTGTTACCCATCATAGTTAGTTACTATGAAATATAAATATGTTGTT 2525 0.3667 MDILLLLLLICKLLFSLFSQISYASDTITLLNPLHDNGSTLVSQGGTFELGFFSSGSSGNRYVGIWYKNIVVRTVVWVANRDHPVKDNSSRMVVQQDESLVLIGQNQSQILWSTNVSTKVSNPFVQLVDNGNLVIQDGDDNKDDTFLWQSFDYPCDTLLQGMKLGWDSKTGLNRRLIAWKSWDDPSSGDFTWGVELGSNPDIVMWKGNVEYFRTGPYTGNMFNGVYGPTNNPLYYYTFFNTKDEVYFQYTLRNSSVITIIVMNQTLYLRNRLTWIPEAKTWTIYQSLPRDSCDVYNTCGPNGNCVIAGSPICECLEGFVPKSPQQWNAMDWREGCVRSEDWSCGVKDKDGFRKFGSMKLPNTTHSWVNQSMTLEECKSKCLKNCSCTAYSNLDTRDGGSGCSIWGGDLYDLRVIESGQDLYSLYGSFLCQPMHVDGKHGKRKKIILATSVIASLLLVMLLAFCIYMTRKRYKGKTKPRIPMEDKDKCKQEDLELPFFYLVTIVDATNNFSIENKLGEGGFGPVYKGILVDGQEIAIKRLSRSSGQGLKEFRNEVILCAKLQHRNLVKVIGYCMEGDEKMLLYEYMPNKSLDLFLFGLLYLHQDSRLRIIHRDLKASNILLDNYMNPKISDFGLARMCGSDQAEGSTSIIVGTHGYMAPEYAIDGLFSTKSDVFSFGVLLLEIVSGKKNRVFTYQAHNHNLIDHAWRLWKEGTPEKLIDACLENSCNIFEVIRFIQISLLCLQHHPDDRPNMTSVIVMLTSENVLPEPKEPGFLIRKFSKEGEQSSNKQTCSSINEVTVSLLDAR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04104 804 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Pste1g04104 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 185 IPR036426 -
Pste1g04104 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 584 - -
Pste1g04104 804 Gene3D Hepatocyte Growth Factor 342 430 - -
Pste1g04104 804 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 749 - -
Pste1g04104 804 CDD PAN_AP_plant 342 421 - -
Pste1g04104 804 Pfam PAN-like domain 343 411 IPR003609 -
Pste1g04104 804 SMART serkin_6 509 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04104 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Pste1g04104 804 ProSiteProfiles Protein kinase domain profile. 509 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04104 804 Pfam Domain of unknown function (DUF3403) 760 804 IPR021820 GO:0004674
Pste1g04104 804 Gene3D - 19 151 IPR036426 -
Pste1g04104 804 Gene3D Transferase(Phosphotransferase) domain 1 587 766 - -
Pste1g04104 804 SMART ntp_6 346 424 IPR003609 -
Pste1g04104 804 SUPERFAMILY Protein kinase-like (PK-like) 492 770 IPR011009 -
Pste1g04104 804 SMART blect_4 32 154 IPR001480 -
Pste1g04104 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Pste1g04104 804 Pfam D-mannose binding lectin 74 180 IPR001480 -
Pste1g04104 804 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Pste1g04104 804 Gene3D Phosphorylase Kinase; domain 1 471 584 - -
Pste1g04104 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 766 - -
Pste1g04104 804 CDD B_lectin 37 154 IPR001480 -
Pste1g04104 804 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Pste1g04104 804 Pfam Protein kinase domain 510 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04104 804 ProSiteProfiles PAN/Apple domain profile. 343 429 IPR003609 -
Pste1g04104 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04104 Pste-Chr1 24228484 24233018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04104 445 775 Receptor kinase-like Gene Family AT4G23230 51.695 1.12e-112 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste1g04104 Pkinase 4.1e-36 CL0016