Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04097 TCATAACAATGATGCGTACCTTCTCTAGATTTCTTCTTTTCTTTCTCCCTTTTTGCTTCGCTTCTTTCTCTTATGCAGCCACTTTGCCAGAAAACGAAGTGGAAGCTCTGAGAGAGATAGGTAAAACAATTGGGAAGGAAAATTGGAACTTCAGCGTAGATCCTTGTAGCGGAAAGAGCAATTGGAAATCGTCGGTTCAATTGCCAGGTTCAGAAAACGCAGTGACCTGTGATTGCTCATTTGTTAATCGCACTGTTTGTCATGTCACAAGCATAGTTTTAAAAGCACAAAATCTTTCGGGTAGTCTCCCTCCGGAGCTTGTCAAATTGCCTTATCTCCAAGAAGTTGACTTCACCCTCAACTACCTCAACGGTACAATTCCTAAACAATGGGGATCCTTAAACCTTGTCAACATTTCCTTTCATGGAAACCGTCTAACTGGTTCAATCCCAAAGGAGCTTGGAAACATCACCACTCTTAAAAGTTTGGTATTGGAGTTCAATCAATTATCTGGAAATCTTCCTCCAGAGCTTGGGAATCTTTCTCAGATTGAAAGACTACTTCTAACCTCCAACAATTTCACTGGAGAGTTACCAGCAACATTGGCTAGGCTCACAACATTGAAGCATGTTGTGATGCAAGGGAGTGGTTTGAGTGGGCCAGTTCCTTCTGGAATTTCATTTTTGCGAAACCTTACTGACTTAATGTTGAGGAGTTGCAACATTTCCGGACCCTTGCCTGATTATCTTGGAAAATTGACTTCTTTGCAAGTGCTAGACCTTAGCTACAACAAATTAACTGGACCAATTCCGAGCAGTTTTGATGGTCTTCTGAAATTGGATATGCTATTTTTAGATGGGAATCGTCTCACCAGATCGCTGCCTCAATGGATAGATAAACCTGACTTTGTAGATCTCTCATATAACAATTTTAGCATCGACAACATAGAGCATCTGAGTTGTCAACAGGGAACTTCATATTCTCTCTATATAAACTGTGGGGGAAAGCTTGTAACTTCTGATGGAAACAAGTTATATGATGATGACTCGGGTGTGACTGGACCTGCAAGATTTCTTTACCCTGGAACGAACTGGGCACTTATCAACACTGGTCATTTCTTTGATAGTGGTCGGAAAGACTACTATACTTGGACTAATACAACTAAGCTTGCAATGGACAATGCTGAATTGTACATGGATGCACGAGTTTCTCCTAATTCACTGATTTATTATGCATTTTGCTTGGGAAATGGAAACTATACAGTAAATCTCCATTTTGCAGAAATAATGTTTACCGATGATAGAACATATAGTAGCCTTGGAAGGCGTAGAAAGTTAGTGGTTAAGGATTTCAATATTGCAAAAGAAGCAGGAGGTGTTGGTAAGGCAGTCGTTAAGAAATTCACAACTTTGGTGACTAGTAATGCCTTGGAAATCAGACTACATTGGGCTGGGAAAGGAACTACTTCCATTCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCTGTTGATCCCAACTTTATACCCCCATCAGAAAGTCATAGTAGCATATCCATAAGGGTTGTGGTTGCAATTGTGGTAGCTGGAGCAATTATTATCATCTTGCTATTTGGTATATTGTGGTGGAAGGGAATTTTAGGTGGAAAAAGATCAATGGTCAAAGAACTAAGGGGTTTAGAATTGCAAACTGGTTTATTTACCCTACGACAAATCAAGGCGGCAACAAATAACTTTAACAAAGCTTTCAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGCGTGCTGTCAGATGGCACTATAGTAGCAGTTAAGCAGCTTTCTACTAAGTCGAGGCAAGGGAATCGTGAATTTACAAATGAAATAGGCTTGATTTCTGCTTTGCAACACCCTTGCTTAGTTAAGCTCTATGGTTATTGTATGGAGGATGATCAACTGTTATTGATATATGAATACATGGAAAACAATAGTCTTGCTCGTGCTTTATTTGCCAAAAATGATGATCTTGAGAAATGCCAACTGAGATTAGATTGGCAAACAAGACAGAGAATTTGTGTTGGTATTGCTAAAGGCCTGGCTTACCTTCATGAAGAGTCAAGACTGAAGATTGTGCATCGAGACATCAAGGCTACAAATGTGTTGTTGGATAAAGATCTTAATCCAAAGATATCTGATTTTGGTTTAGCCAAACTCAATGATGAGGACAAAACTCACTTGAGCACCAGAATAGCTGGCACTTATGGGTACATTGCTCCCGAGTATGCAATGCATGGTTACCTGACAGACAAAGCCGATGTCTATAGTTTTGGAATTGTTACATTGGAAATTGTTAGTGGGATGAGCAGCACCATTAGCCAGCCTATGGAAGAATGCTTCTCTCTCCTTGACTGGGTGAATGTCTTGAAAGAAAAAGGTACTCTAATAGAGGTTGTGGATAAGAGATTAGGTGAAGATTTCAATAAAAAGGAGGCAACCGTGATGATAAATGTAGCTCTTTTATGCACTAAAGTCTCTCCAGCACTTAGGCCAACTATGTCTTCAGTGGTAAGCATGCTTGAAGGTAGAACAATTATTCAAGAGTTAGAGTCAGACAACACAAGAGAGGCATTGAATGATGAGAAATTTGAGAAGATGCGACACTATTACCAAAATAGAGGAGAAAATAACATAGTTGAGTCTGACAGTCAAAGCCAGAGTGTCCCTACTACAGAAGCTTCTGCATTTATATCTGATACGAGTTCTTCTGGTAGGTAAATTAGAAGTTAGAGAACCTAAAGAGGTGGAAAATCATTTATATATGTATATTTAGTTTATGGTACTTTCACCAAAAATAGAGGAGAAAATAATTTTTTTTTTATTTTTGGAAAAGCTTTTTAAAGAAAAAGCGATTATTT 2905 0.39 MMRTFSRFLLFFLPFCFASFSYAATLPENEVEALREIGKTIGKENWNFSVDPCSGKSNWKSSVQLPGSENAVTCDCSFVNRTVCHVTSIVLKAQNLSGSLPPELVKLPYLQEVDFTLNYLNGTIPKQWGSLNLVNISFHGNRLTGSIPKELGNITTLKSLVLEFNQLSGNLPPELGNLSQIERLLLTSNNFTGELPATLARLTTLKHVVMQGSGLSGPVPSGISFLRNLTDLMLRSCNISGPLPDYLGKLTSLQVLDLSYNKLTGPIPSSFDGLLKLDMLFLDGNRLTRSLPQWIDKPDFVDLSYNNFSIDNIEHLSCQQGTSYSLYINCGGKLVTSDGNKLYDDDSGVTGPARFLYPGTNWALINTGHFFDSGRKDYYTWTNTTKLAMDNAELYMDARVSPNSLIYYAFCLGNGNYTVNLHFAEIMFTDDRTYSSLGRRRKLVVKDFNIAKEAGGVGKAVVKKFTTLVTSNALEIRLHWAGKGTTSIPFGSVYGPLISAISVDPNFIPPSESHSSISIRVVVAIVVAGAIIIILLFGILWWKGILGGKRSMVKELRGLELQTGLFTLRQIKAATNNFNKAFKIGEGGFGPVYKGVLSDGTIVAVKQLSTKSRQGNREFTNEIGLISALQHPCLVKLYGYCMEDDQLLLIYEYMENNSLARALFAKNDDLEKCQLRLDWQTRQRICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLNDEDKTHLSTRIAGTYGYIAPEYAMHGYLTDKADVYSFGIVTLEIVSGMSSTISQPMEECFSLLDWVNVLKEKGTLIEVVDKRLGEDFNKKEATVMINVALLCTKVSPALRPTMSSVVSMLEGRTIIQELESDNTREALNDEKFEKMRHYYQNRGENNIVESDSQSQSVPTTEASAFISDTSSSGR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04097 918 Gene3D Phosphorylase Kinase; domain 1 548 653 - -
Pste1g04097 918 Gene3D Transferase(Phosphotransferase) domain 1 654 879 - -
Pste1g04097 918 FunFam Putative LRR receptor-like serine/threonine-protein kinase 654 865 - -
Pste1g04097 918 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 547 653 - -
Pste1g04097 918 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 30 189 - -
Pste1g04097 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 704 716 IPR008271 GO:0004672|GO:0006468
Pste1g04097 918 ProSiteProfiles Protein kinase domain profile. 578 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04097 918 CDD STKc_IRAK 584 855 - -
Pste1g04097 918 SUPERFAMILY L domain-like 59 310 - -
Pste1g04097 918 Gene3D Ribonuclease Inhibitor 202 323 IPR032675 -
Pste1g04097 918 Gene3D Ribonuclease Inhibitor 30 201 IPR032675 -
Pste1g04097 918 Pfam Protein kinase domain 580 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04097 918 FunFam Leucine-rich repeat receptor protein kinase EMS1 195 294 - -
Pste1g04097 918 Gene3D - 324 505 - -
Pste1g04097 918 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 884 - -
Pste1g04097 918 Pfam Leucine rich repeat 227 287 IPR001611 GO:0005515
Pste1g04097 918 Pfam Malectin domain 325 501 IPR021720 -
Pste1g04097 918 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 323 506 - -
Pste1g04097 918 SMART serkin_6 578 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04097 918 SUPERFAMILY Protein kinase-like (PK-like) 562 855 IPR011009 -
Pste1g04097 918 MobiDBLite consensus disorder prediction 887 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04097 Pste-Chr1 24108718 24124885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04097 20 888 Receptor kinase-like Gene Family AT1G53420 51.059 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04097 Pkinase 6.3e-47 CL0016