Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04096 GACCAATTAATCCACAAAGTAAAAGCTCTTGATCTCTGAGCTGAATTTGCTTCCTTCCAATTCTCATTCTCACCCAAATTTGAAGCCAAACATGTCGTAAATATTGTTCCTACCACTTAATAATATATATCCCTTTTTCATAAATTCTCATGAAACTCTTTTCCATCATATGGGTTCATCTCAAGTCTTCTTCCTACAATTCCTAGTTGCATTTTTCTTTGTCTCTTTAGCTTTAGGAGACACTCTGCCAGAAGATGAAGTACGAGCTCTGAAGGACATAGGTGAGACATTGGGGAAGAAGAATTGGGATTTCAGTGTTGATCCATGCAGTGGAGAAGGCAACTGGACATCACGTACTAAAGTGAGAGGGACAGAAAATAATGTCACCTGTGATTGCTCCTTTGAGAATGGCACAATCTGCCATGTTACTCACATACTTTTGAAAGCACAAAATCTGAAAGGAACTCTCCCGCTAGCGATGGTTAGGTTGTCTTATCTTCAAGAAATTGACCTTAGTCGCAATTACCTGAACGGGACGATTCCTTCAGAGTGGAGCTTCTTGAATCTTGTCCAGATTTCTCTAAGTGCAAATAGACTATCGGGTTCAATCCCTGTAGAGTTGGCAAACATCTCCACTCTTCAAAGTTTGACCCTGGAATTCAACCAACTTTCTGGAAATCTTCCACCTGAGCTTGGGAATCTTCCAAATATCCAAAGACTGTATGATGTTTATTTTACTTTTCAATTACTTTTGCTTTGGCTACTCACCTCCAACAATTTTACTGGAGAATTACCTGCAACATTTGCAAGACTCACTAACTTGAAGGAAGTTCGACTAGGGGACAACAAGTTCTCTGGAAAGATACCTGACTTTATTCAAAGCTGGACTAGAACTGGGTTAAATGGGCCAATTCCTTCCGGAATTTCACTGCTTGAAAGTTTAACTGACTTGTACGTATGGAGAATTAGTGATCTAAATGGATCTGACTATTTTCCTTTTCCACCACTCAACAATCTCACAAATTTAGAAATTTTGATTCTGAGGAGTTGCAACATCAATGGAACAATACCTGAATATCTTGGGACTATATCTAGTTTACAAACCCTAGACCTCAGCTTTAACAAATTAAGTGGACAAATTCCAAGTAGCTTCGAGTATGGCCTAAGAAAGACAGATTATATATATTTAACTGGAAACCTCCTCACAGGACCAGTACCTGCATGGACAGAGAAAGAGAAAAATGTAGATCTCTCATACAATAACTTTAGCATGGAAAACCCAGGGCAGCAACCATGTCAAAAGGGAAATGTAGGGACCATTTCATGTTTAAAAAATGTTGCCTGTCCTAAAGTGTCATACTTTCTTCATATAAATTGTGGTGGAAAACAAATAACAGTCAATGGGAACGAAACATATGATGATGATACAGATGCTGCAGGACCATCTAGATTTCATCTTGGTGGAAAAAACTGGGGTTTTAGCAGCACCGGTCACTTCATGGATAATGACCATGCAGAATATTCTATTTGGCTAAATCAATCAAAGCTTTTCATAGCTGATGCTGAATTATACATGGATGCATGTGTCTCTCCCATTTCTCTTACATATTATGGATTTTGTTTGGGAAATGGAAACTACACGGTGAATCTACACTTTGCAGAGGTCATGTTCACAGATGATCAAACATATAACAGCTTAGGAAGACGCATATTTGATGTCTACATTCAGGGAAATATGATGCTGAGAGATTTCAATATTGCAGAAGAAGCAGGAGGGGTTAATAAAGCTATGACGAAATCATTCACTATTATGATTAGTAGTAACACATTAGAAATCCGCTTATATTGGGCTGGAAAAGGCACAATTGTTATCCCATTTAAGTCAGTATATGGTCCTCTTATTTCAGCTATATCTGTTAATCCCGATTTCATCCCTCCCTCAGAAAATGGAAGTAGCATGTCTGCAGGGTCTGTGGTTGCAATAGTGGCCGGTGTAGTAGTTTTTCTTGTGTTGGTATTTGGTATACTTTGGTGGAGAGGCTGTCTAAGACAGAAAAGTTCTTTAGCAAAAGATCTACAATCTTTGTTTGAATTGACAGAGTTAAAGGGTTTAAAACTGCAAATGGGTATATTTGCTTTACGACAAATCAAAGTTGCAACAAACAACTTCGACAAGGCCAACAAAATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGAAATTTATCAGATGGGACAATAATAGCAGTCAAGCAGCTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTCTGAATGAGTTAGGCATGATTTCGGCTTTGCAACACCCTTGTCTTGTTAAACTCTACGGTTGTTGTGTTGAAGGAGATCAGTTATTGTTGGTATATGAATATATGGAAAACAACAGCCTTGCTCGTGCTTTGTTTGGTCCAGAAGAACACCAAATAAATTTGGATTGGCCAACAAGACAAAAGATCTGTGTTGGTATTGCCAGAGGTTTGGCATACCTTCATGAGGAATCAAGATTGAAAATTGTTCATAGAGATATCAAGGCCACTAATGTGTTACTTGATAAAGATCTAAACCCAAAGATATCCGACTTTGGTTTAGCCAAGCTTGATGAAGAGGACAATACTCATATAAGCACCAGAATTGCTGGAACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACTGACAAAGCAGATGTCTATAGCTTTGGAGTTGTTGCTTTGGAAATTTTAAGTGGGAGGAGCATTATGATTCAACGGCATAAACCAGAAGCATTCCATCTTCTTGATTGGGCAAATATGTTGAAAGAGAAAGGTAATCTAATGGAGCTAGTTGATAGAAGATTGGGTTTGGACTTCAACAAAAAGGAGGTTACCACAATGATCAATGTGGCTCTTTTATGTACCAATGTCACTGCCTCCCTTAGGCCTTCCATGTCCTCAGTAGTAAGCATGCTTGAAGGTAAATCTGCTGTTCAAGAGGTGATGGCTGCATGCAAGAAATTGGCGATTTTGGGAAAGGGTTGTTATGGCACTGTTTATCTTGCTGCAGTGATTCTCCCACCACAATTGGAGTGGAAGATGTTAGCTGTGAAGAGTTCAACACCTTTGTCTGTCTCGATTTGTTCAATGCAGAAAGAGAAAAGAATGCTGGAGTTATTCAAGGGCTGCAAAGAAATTGTTGAATGCTATTTTGACGAGTTCAGCTTTGAGAGAGAAGGTTTTATCTACAATCTTTACATGGAATTTGCTACTCACGGTTGTCTTTGGGATTTGATATGCAAAGGGCCACTCCCAGATGATGAAGTAAGAATGTACACTCATATGATTCTTAAAGGTCTTTCCTGCATTCATACAAAGGGTGTGGTTCATTGTGATCTCAAACCTGAAAACATTCTTCTCTTTCCTTCATGTGATGATGGTGGTGCAAGGTTTCAACTAAAGATTGCTGATTTTGGGTTATCAAGAGAAGAGTCAAAGGGTCCATATGGAGAAATCAAGTTTAGAGGGACACCCTTTTATATGTCACCAGAATCTATTCTTGGTGAGATTGTAACAGTGTTAGATGTATGGTCTCTTGGGTGCATTGTGATTGAGATGATCACAGGATTTCATGCATGGTGGAACATCAAAACCCAAAGGGAATTAATGTTCAGGCTTGGGTTTCTTGAACAAGCACCAATAATACCCAATGGACTCAGCTGGGATTGCCAACATTTCTTGAGCAAGTGTTTTCAGAAAGATCCCAGGCAACGATGGAGTGCTGCAATGCTGTTGGATCATCCTTTCCTTTATTCTGCATCGTATAACATGCAAGGATATCTTGCCTCTTCTTCTGGATCTCGTTAA 3874 0.3913 MGSSQVFFLQFLVAFFFVSLALGDTLPEDEVRALKDIGETLGKKNWDFSVDPCSGEGNWTSRTKVRGTENNVTCDCSFENGTICHVTHILLKAQNLKGTLPLAMVRLSYLQEIDLSRNYLNGTIPSEWSFLNLVQISLSANRLSGSIPVELANISTLQSLTLEFNQLSGNLPPELGNLPNIQRLYDVYFTFQLLLLWLLTSNNFTGELPATFARLTNLKEVRLGDNKFSGKIPDFIQSWTRTGLNGPIPSGISLLESLTDLYVWRISDLNGSDYFPFPPLNNLTNLEILILRSCNINGTIPEYLGTISSLQTLDLSFNKLSGQIPSSFEYGLRKTDYIYLTGNLLTGPVPAWTEKEKNVDLSYNNFSMENPGQQPCQKGNVGTISCLKNVACPKVSYFLHINCGGKQITVNGNETYDDDTDAAGPSRFHLGGKNWGFSSTGHFMDNDHAEYSIWLNQSKLFIADAELYMDACVSPISLTYYGFCLGNGNYTVNLHFAEVMFTDDQTYNSLGRRIFDVYIQGNMMLRDFNIAEEAGGVNKAMTKSFTIMISSNTLEIRLYWAGKGTIVIPFKSVYGPLISAISVNPDFIPPSENGSSMSAGSVVAIVAGVVVFLVLVFGILWWRGCLRQKSSLAKDLQSLFELTELKGLKLQMGIFALRQIKVATNNFDKANKIGEGGFGPVYKGNLSDGTIIAVKQLSSKSKQGNREFLNELGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEHQINLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEILSGRSIMIQRHKPEAFHLLDWANMLKEKGNLMELVDRRLGLDFNKKEVTTMINVALLCTNVTASLRPSMSSVVSMLEGKSAVQEVMAACKKLAILGKGCYGTVYLAAVILPPQLEWKMLAVKSSTPLSVSICSMQKEKRMLELFKGCKEIVECYFDEFSFEREGFIYNLYMEFATHGCLWDLICKGPLPDDEVRMYTHMILKGLSCIHTKGVVHCDLKPENILLFPSCDDGGARFQLKIADFGLSREESKGPYGEIKFRGTPFYMSPESILGEIVTVLDVWSLGCIVIEMITGFHAWWNIKTQRELMFRLGFLEQAPIIPNGLSWDCQHFLSKCFQKDPRQRWSAAMLLDHPFLYSASYNMQGYLASSSGSR 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04096 1234 Gene3D Transferase(Phosphotransferase) domain 1 953 1230 - -
Pste1g04096 1234 Pfam Leucine rich repeat 284 345 IPR001611 GO:0005515
Pste1g04096 1234 CDD STKc_IRAK 673 940 - -
Pste1g04096 1234 SUPERFAMILY L domain-like 61 351 - -
Pste1g04096 1234 SUPERFAMILY Protein kinase-like (PK-like) 652 939 IPR011009 -
Pste1g04096 1234 Pfam Malectin domain 399 581 IPR021720 -
Pste1g04096 1234 Gene3D Phosphorylase Kinase; domain 1 628 742 - -
Pste1g04096 1234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1074 1086 IPR008271 GO:0004672|GO:0006468
Pste1g04096 1234 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 32 191 - -
Pste1g04096 1234 Gene3D - 395 586 - -
Pste1g04096 1234 Pfam Protein kinase domain 953 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04096 1234 Pfam Protein tyrosine and serine/threonine kinase 670 938 IPR001245 GO:0004672|GO:0006468
Pste1g04096 1234 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1063 1158 - -
Pste1g04096 1234 CDD STKc_MAPKKK 952 1216 - -
Pste1g04096 1234 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 950 - -
Pste1g04096 1234 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Pste1g04096 1234 Gene3D Ribonuclease Inhibitor 269 381 IPR032675 -
Pste1g04096 1234 SMART serkin_6 667 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04096 1234 SMART serkin_6 951 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04096 1234 ProSitePatterns Protein kinases ATP-binding region signature. 957 984 IPR017441 GO:0005524
Pste1g04096 1234 ProSiteProfiles Protein kinase domain profile. 667 1216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04096 1234 SUPERFAMILY Protein kinase-like (PK-like) 954 1220 IPR011009 -
Pste1g04096 1234 Gene3D Ribonuclease Inhibitor 191 268 IPR032675 -
Pste1g04096 1234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pste1g04096 1234 Gene3D Transferase(Phosphotransferase) domain 1 743 952 - -
Pste1g04096 1234 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 637 742 - -
Pste1g04096 1234 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 396 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04096 Pste-Chr1 24065926 24085407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04096 17 945 Receptor kinase-like Gene Family AT1G53420 56.462 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04096 PK_Tyr_Ser-Thr 4.1e-48 CL0016