Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04094 GAACAAATAGCAAGATTTTGAAGATTTGAGAGTTGAGACAGTAACATCATGCGGTTAGTCTTTGCTCTTGTGTTGGGGCTTGTGGCTTTGAATTGTGTTCAAGTGTTTGAAACCAATGCTCAACTCATACCACAAGATGAAGTGAAAGTCCTACAAGAAATATTGGATAAACTACAGATTGTGCATTGGAAAGTCACAAATCGTTCTTGTGTAGAGGATGGAGGCTTCAATGTCAAGGTTAATATAAATGATGACATAGTGAGGAATGTCACATGCGATTGCTCCTTCGGAAGTGACACAGTTTGCCATGTTGATAGAATGTACGTCTTTTTCTGGTTTGGCGATGATAGTATTCTCAAGGGTCAAAATATATCTGGAGTTCTTCCCAGTGAATTTGCAAATCTCACGCAACTGAAAGAACTTGATCTTAGTCGTAACTATCTCAATGGCTCTCTTCCAACAAATTTTTTTCCCAAGTCACTGGTTATTTTGTCCCTACTGGGAAACCGACTAAGTGGTCCAATTCCCACACAAATTGGTGATATTGCTAGTCTGGAGGATCTGAACTTAGAATGTAATCAACTTGAAGGACCACTTCCTCTTAGTCTTGGAAATTTCAGCAAGTTGAAGAGACTGCTTCTTTCTGCTAATAATTTTACAGGGACAATACCAGAAACATTAATTAAATTAAAGAATCTCACTGACTTTAGGATAGATGGAAATAGTTTATCTGGACCAATACCCAGTTTCATTGGGAACTGGACCAATCTTGACAGACTGGATTTGCAGGGAACAAATATGGAAGGACCAATTCCTCCCACTATATCTTTGTTGAAAAATTTGACTCAACTGAGAATAAGTGATTTGAATGGACCAACTATGACGTTTCCTAATCTGAGGGATTTGAAAAACTTAAAAAGACTGGAATTGAGAAATTGCTTAATCAAGGATCGCATTCCAGATTACATCGGTGAAATGGCAAATATGAAAACTTTAGACCTAAGCTTCAACATGTTGACTGGTCCAATTCCAGATCCAATTAGGAAATTGGATGGGCTAAATTACTTGTTTCTGACCAATAATTCTCTGAACGGACCAATTCAGGACTGGATACTGAACTTCAAAAAAAAAATGGATTTATCTTACAACAATTTTACAAAGTCTTCTGCATCTAGCTGTCAACACTCAGATGTGAACTTGGCTTCAAGCCATTCTTCAGCAGCAGTAACTTCGGCTTCAACTTTTTGTTTGAAGAGGGACCTTCCTTGTGCAGGAAAACCCCAGTATAAGTCATTGTTCATAAACTGTGGAGGAGAGCAGGGGCAGTTTGAAGGCAATAACTATTATGGGGACCTCAACCAAAATGGCATTTCATACTTTGATCTTAGAAATGAAGGACAATGGGCTTATAGCAGCACAGGAGTATATTTGGGAGATGATGATGCAAATTTTATAGCACAAAATACATATTCTTTGAATATTAATGGTCCAGAATACTACCAAAATGCTCGCCTTTCCCCTGTGTCACTTAACTACTATGGCCTTTGTATGCCAAAGGGAAATTATAAAGTGAAACTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACTTATAGCAGTCTAGGACGGCGCATATTTGATGTTTCAGTTCAAGTAGAAATTTTCAATGCTGCATCTTCACAGGGTGTTAGATATTTGAAAGATTTTAATATTGCGGAAGAGGCTGGTGGAGTGGGAAAGAACATCACTAAGGAATTTGATGTTGATGTTGATGATGATGGAACCCTGGAAATCCACTTATATTGGGCAGGGAAAGGAACCACTTCAATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATTGAGATGATACCAAACTTTGAGGATTCTTCAAAAGGGTTGTCTGCTGGAGCTATTGTTGGAATTGTTGCTGCATCATGTGGTGTTGTCTTATTAATACTGATTGCCCTGTGGAAGATGGGTTTCCTTTGTAGGAAAGATACTACAGATAAAGGCAAGACTCAAAACCAAAATAAAAAACTTCTAGACATGAAAACGGGTTATTTCAGCTTAAGACAAATTAAAGCAGCTACTAATAACTTCGACCCTGCAAATAAGATAGGTGAAGGAGGATTTGGGCCTGTATACAAGGGTATGCTGTCAGATGGTGATGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCTAAGCAAGGGAACCGTGAATTTGTCAATGAAATTGGAATGATCTCTGCTTTGCAGCATCCAAATCTGGTGAAGCTTTATGGATGTTGCATTGAAGGAAACCAGTTGCTACTAATATATGAATACATGGAGAACAACAGTCTTGCTCGTGCACTTTTTGCAAGGGGATTGGCTTATCTTCATGAGGAATCTAGGTTGAAAATAGTACACAGGGACATTAAGGCGACCAATGTATTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAACTTGATGAAGAAGAGAATACTCATATTAGTACACGTATAGCTGGAACAATTGGTTACATGGCTCCAGAATATGCTATGCGGGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTAGTAGCTTTAGAGATTGTTAGTGGAAAAAGCAACACAAAATACAGGCCAAAGGAGGAGTTTGTATATCTTCTAGATTGGGCCTATGTTCTACAAGAGCAAGGAAACCTTCTGGAGCTGGTTGATCCAAGTGTTGGTTCAAAGTACTCCTCAGAGGAGGCCATGAGAATGCTGAGCTTGGCACTCTTATGCACCAATCCATCTCCCACTCTTAGACCAACCATGTCATCTGTAGTGAGCATGCTTGAAGGCAAGATTCCAATTCAAGCGCCGATAATCAAGCGCAGTGAGAGCAACCAAGATGTAAGATTTAAAGCCTTTCAGTTGTTATCACAAGACAGTCAAACTCATGTTTCTTCTGCATACTCACAAGAAAGTATGAAGCAAAGACACAAAGAAGATGGACCCTGGATTGACTCCTCCATATCTCTTCCTAGTGGAGATGATTATTCTTCATCCAGTAAACTTGTTCAAGATTCACATGATGTATGA 3108 0.3903 MRLVFALVLGLVALNCVQVFETNAQLIPQDEVKVLQEILDKLQIVHWKVTNRSCVEDGGFNVKVNINDDIVRNVTCDCSFGSDTVCHVDRMYVFFWFGDDSILKGQNISGVLPSEFANLTQLKELDLSRNYLNGSLPTNFFPKSLVILSLLGNRLSGPIPTQIGDIASLEDLNLECNQLEGPLPLSLGNFSKLKRLLLSANNFTGTIPETLIKLKNLTDFRIDGNSLSGPIPSFIGNWTNLDRLDLQGTNMEGPIPPTISLLKNLTQLRISDLNGPTMTFPNLRDLKNLKRLELRNCLIKDRIPDYIGEMANMKTLDLSFNMLTGPIPDPIRKLDGLNYLFLTNNSLNGPIQDWILNFKKKMDLSYNNFTKSSASSCQHSDVNLASSHSSAAVTSASTFCLKRDLPCAGKPQYKSLFINCGGEQGQFEGNNYYGDLNQNGISYFDLRNEGQWAYSSTGVYLGDDDANFIAQNTYSLNINGPEYYQNARLSPVSLNYYGLCMPKGNYKVKLHFAEIMFSDDQTYSSLGRRIFDVSVQVEIFNAASSQGVRYLKDFNIAEEAGGVGKNITKEFDVDVDDDGTLEIHLYWAGKGTTSIPDRGVYGPLISAIEMIPNFEDSSKGLSAGAIVGIVAASCGVVLLILIALWKMGFLCRKDTTDKGKTQNQNKKLLDMKTGYFSLRQIKAATNNFDPANKIGEGGFGPVYKGMLSDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTKYRPKEEFVYLLDWAYVLQEQGNLLELVDPSVGSKYSSEEAMRMLSLALLCTNPSPTLRPTMSSVVSMLEGKIPIQAPIIKRSESNQDVRFKAFQLLSQDSQTHVSSAYSQESMKQRHKEDGPWIDSSISLPSGDDYSSSSKLVQDSHDV 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04094 1019 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 207 274 - -
Pste1g04094 1019 MobiDBLite consensus disorder prediction 974 1019 - -
Pste1g04094 1019 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 970 - -
Pste1g04094 1019 SMART serkin_6 688 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04094 1019 Gene3D Transferase(Phosphotransferase) domain 1 764 959 - -
Pste1g04094 1019 Pfam Protein kinase domain 691 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04094 1019 SUPERFAMILY L domain-like 103 371 - -
Pste1g04094 1019 Gene3D Ribonuclease Inhibitor 209 276 IPR032675 -
Pste1g04094 1019 Gene3D Ribonuclease Inhibitor 46 208 IPR032675 -
Pste1g04094 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 413 613 - -
Pste1g04094 1019 Gene3D Ribonuclease Inhibitor 277 398 IPR032675 -
Pste1g04094 1019 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 31 206 - -
Pste1g04094 1019 ProSiteProfiles Protein kinase domain profile. 688 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04094 1019 CDD STKc_IRAK 694 940 - -
Pste1g04094 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pste1g04094 1019 Gene3D - 415 614 - -
Pste1g04094 1019 SUPERFAMILY Protein kinase-like (PK-like) 668 939 IPR011009 -
Pste1g04094 1019 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 275 398 - -
Pste1g04094 1019 Pfam Malectin domain 415 608 IPR021720 -
Pste1g04094 1019 Gene3D Phosphorylase Kinase; domain 1 650 763 - -
Pste1g04094 1019 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 657 763 - -
Pste1g04094 1019 FunFam Putative LRR receptor-like serine/threonine-protein kinase 764 950 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04094 Pste-Chr1 24040631 24056151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04094 9 1004 Receptor kinase-like Gene Family AT1G53440 58.772 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04094 Pkinase 1.5e-41 CL0016