Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04081 ATGATGAGGCTCAACTTGTTCACGCTTTGCTTATCTTCATTGTTATATGCTGTTTATGCATTGAACACTGATGGGGTGGCTCTTTTGTCACTCCAGAAGTATTGGACATTTGTTCCTTCTCCAATAAATTCAAGTTGGAATGCTTCTGATTCCACTCCATGCTCTTGGTTGGGAGTTCAGTGTGACAATAACCACAACACAATCTTTCTTAATCTCTCTGGATACTCAATTTCAGGTCTATTAGGACCTGAAATAGCATACTTGAGTCACTTGCAAACACTTGACTTGGCCTTGAACAACTTCTCAGGGAAAATACCTCCTGAGTTAGGAAATTGTAGTCTTCTTGAGAATCTGAAACTTGCTGATAACATAATCAGTGGAGAAATACCGGATAGTTTGAGAAACTTGCAGAATTTAGTGTATTTAAACATTATGAGCAATATCCTAACTGGTCAAATTCCTGAGTTCTTGTTTCAACTTCGACACCTTGAACATATTCTACTCAACCTAAACTATTTGACTGGTCCCATTCCAATGAATGTTGGGAACAGTACAAAACTTTTGAGGTTGTATCTAGAGGTTAATCAGTTGTCAGGAATGATTCCCCACTCCATTGGAAACTGTAGTAAATTAAAAGAATTGTATTTGGATCATAACCAATTGCAAGGAGTTCTACCTGAAAGTCTTAACCATCTCCAAAGTGTTGTTTATTTAGTTGTGACAAATAACAGACTTGACGGTACAATTCCATTGTTGGGTTCTGGTGGGTGCCCAAATTTATATTATTTGGACCTTTCCTTCAATAAATTTAGTGGGGGCGTGCCTTCAAGCTTGGGAAATTGCAGCAGATTAACAGAATTTTATGCTCTCAACACAAGTTTAGGAGGCAGCATCCCATCATCATTAGGCCAACTAAGTGAACTTTCTGTTCTACGCCTTGAATTCAATCATTTGACTGGACAAATACCTTCAAAAATTGGTAATTGTAGGTCCTTAAAAGTGTTGATGTTAAATAACAATGAACTTGAGGGAGAGATTCCTAGAGAGTTAGGAATGCTAAGTCAATTGCAAGATCTTAGACTTCATTACAACCATTTAACAGGTGAATTTCCACTAAGCCTTTGGAAGATTCCTACCCTTGAGTATGTGCATGTCTATTACAATAACCTTTCTGGGGAGATACCTTTAGAATTGGCAGAACTCAAACAACTAAAATATATCACATTGTATAACAACCAATTCTCTGGAGTCATTCCTCAAAGCTTAGGAATCAATAGCAGTTTAGTACAATTTGATGTTTCATACAATTACTTCACTGGCAAGATCCCACCAAATCTTTGCTTTGGACAAAAATTAGAAAGGCTAATCCTGGTTTCTAATCATTTTCAAGGTGGTGTACCTCTTGATATAGGAAAATGTACAACTCTTACTAGGTTACGTCTTGATGGAAACAACTTAACAGGACCTCTACCTGATTTCACAAGCAATAGTAGTCTCAGCTACATGGACATCAGCGAGAACAATATCAGTGGGGCAATTCCATCAAGTTTGGGAAACTGCGCAAATCTTACTGATGTTATTTTGTCCTACAATAGTTTCTCAGGGCTCATACCCTTTGAGCTTGGAAGCCTTGTGAATCTTCACAGGCTGAACCTTTCTCACAACAAGTTGGAAGGTCCTGTGCCACCTGAGTTTTCAAATTGTAGCAAAATGGAATACTTTGATGTTGGATTCAATTCTCTTAATGGCTCATTCCCATCAAGTTTGAGAACTTGGACAGGGTTGACCACATTGAATTTAAGGGAAAATCATTTCAGTGGTGGTATCCCAACTTTCTTATCAGAATTTAAACACCTTTCTGATCTACATCTTGGGGGGAACTTTTTTGAAGGCCAAATTCCTAGATCAATTGGTGAGTTGCAGAATCTTCTTTATGAGTTGAATCTAAGTGCTAATAATTTGACTGGTGAAATTCCTCCAGAGATTGGGAAACTGAAATTGCTGCAAAGCCTGGATCTTTCTCTCAATAATCTCACTGGAAAAGTTGAAGTTCTTGAAGATCTCTATTCATTGATTTCACTCAACATTTCATACAATTCCTTTTTTGGTCCTCTTCCAGACACACTAGTGAATTTGCTCCATTCTTCTCCATCATCATTCTTGGGCAATCGTGGCTTATGTATCAGATGCTTTCCATCACAAGGGCTAAATTGTTCCAAAAGTAACATCATGAAGCCATGTGATGAGAACAATTCCACACATCCAAAAGGTCTGAGTAAAATTAAAGTTGTGATGATATCACTTGGATCCTCACTACTTGTAACATTTCTGTTTCTTGGTCTTGTTTATGTGCTACACTATAAGCAAGATGTCAAGATTTTCCCAAAACAACGATCTTCTTTACTAAAAAAAGTGATGAAGGTTACAGAGAACCTACATGATAATCATATCATAGAAAGAGGAGCACATGGAGTTATTTACAAAGCTGAGTTCAGTCCAGACAAAGTTTTTGTCATAAAGAAAATTCCCTTTGAAGAAAACAAAGCTCAGATCACAACCATGACCACAGAGATTGAAACCATTGGGAAGATTAGGCATAGAAATCTGGTAAGAATAGAAAACTTTTGGTTAAGAAAGGACTGTGGTCTAATTTTGTACAAGTACATGGAAAATGGAAGTCTTCATGATGTTTTGCATGAGAAGTATCCACCACCATCTTTAGAGTGGAGTTTTCGATATAAGATTGCTCTTGGAATTGCACATGGACTTGAATATCTTCATCATGATTGTGATCCTGTCATAGTGCATAGAGACATTAAGCCAAAGAATATACTTTTGGACTCTGATATGGAGCCTCATATTGCTGATTTTGGCATTGCCACGCTTCTAAGCCATTCCTCTACTTCATTAAAATCTCTCTTGGTTCCTGGTACAATTGGATATATTGCACCAGAAAATGGTTATTCAGCAATGATGAGTAGGAAGTCTGATGTATATAGTTATGGAGTGGTTTTGCTAGAGCTGATAAGCAGAAAGAAGGTGCTAAATGATCCTTCATTTGTGGAGGAAACAGATCTTGTGGGGTGGGTTACATCTACCTGGGAAAAAACAAGAAGCATTGATGGAATTATTGACTCAGGTCTTGAAGATGACCTTTTTACCTCAAATGTGAGGGAACAAATTGAACAAGTGTTTTTTGTGGCATTGAGATGTATTGAAAAGCAACCAAGTGAGAGACCAACAATGAGAAAAGTTGTCATGGACTTGATAGTTTGATGCAAAGCTCCTCATATTAACTAACAGAAAGTGGAACTACCAAG 3320 0.375 MMRLNLFTLCLSSLLYAVYALNTDGVALLSLQKYWTFVPSPINSSWNASDSTPCSWLGVQCDNNHNTIFLNLSGYSISGLLGPEIAYLSHLQTLDLALNNFSGKIPPELGNCSLLENLKLADNIISGEIPDSLRNLQNLVYLNIMSNILTGQIPEFLFQLRHLEHILLNLNYLTGPIPMNVGNSTKLLRLYLEVNQLSGMIPHSIGNCSKLKELYLDHNQLQGVLPESLNHLQSVVYLVVTNNRLDGTIPLLGSGGCPNLYYLDLSFNKFSGGVPSSLGNCSRLTEFYALNTSLGGSIPSSLGQLSELSVLRLEFNHLTGQIPSKIGNCRSLKVLMLNNNELEGEIPRELGMLSQLQDLRLHYNHLTGEFPLSLWKIPTLEYVHVYYNNLSGEIPLELAELKQLKYITLYNNQFSGVIPQSLGINSSLVQFDVSYNYFTGKIPPNLCFGQKLERLILVSNHFQGGVPLDIGKCTTLTRLRLDGNNLTGPLPDFTSNSSLSYMDISENNISGAIPSSLGNCANLTDVILSYNSFSGLIPFELGSLVNLHRLNLSHNKLEGPVPPEFSNCSKMEYFDVGFNSLNGSFPSSLRTWTGLTTLNLRENHFSGGIPTFLSEFKHLSDLHLGGNFFEGQIPRSIGELQNLLYELNLSANNLTGEIPPEIGKLKLLQSLDLSLNNLTGKVEVLEDLYSLISLNISYNSFFGPLPDTLVNLLHSSPSSFLGNRGLCIRCFPSQGLNCSKSNIMKPCDENNSTHPKGLSKIKVVMISLGSSLLVTFLFLGLVYVLHYKQDVKIFPKQRSSLLKKVMKVTENLHDNHIIERGAHGVIYKAEFSPDKVFVIKKIPFEENKAQITTMTTEIETIGKIRHRNLVRIENFWLRKDCGLILYKYMENGSLHDVLHEKYPPPSLEWSFRYKIALGIAHGLEYLHHDCDPVIVHRDIKPKNILLDSDMEPHIADFGIATLLSHSSTSLKSLLVPGTIGYIAPENGYSAMMSRKSDVYSYGVVLLELISRKKVLNDPSFVEETDLVGWVTSTWEKTRSIDGIIDSGLEDDLFTSNVREQIEQVFFVALRCIEKQPSERPTMRKVVMDLIV 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04081 1091 Pfam Leucine rich repeat 307 366 IPR001611 GO:0005515
Pste1g04081 1091 Pfam Leucine rich repeat 498 557 IPR001611 GO:0005515
Pste1g04081 1091 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Pste1g04081 1091 SUPERFAMILY Protein kinase-like (PK-like) 796 1089 IPR011009 -
Pste1g04081 1091 Gene3D Transferase(Phosphotransferase) domain 1 889 1090 - -
Pste1g04081 1091 Gene3D Ribonuclease Inhibitor 24 133 IPR032675 -
Pste1g04081 1091 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 253 450 - -
Pste1g04081 1091 Gene3D Ribonuclease Inhibitor 206 291 IPR032675 -
Pste1g04081 1091 Gene3D Ribonuclease Inhibitor 134 205 IPR032675 -
Pste1g04081 1091 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 252 - -
Pste1g04081 1091 SUPERFAMILY RNI-like 418 715 - -
Pste1g04081 1091 SMART serkin_6 812 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04081 1091 Pfam Protein kinase domain 814 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04081 1091 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 451 736 - -
Pste1g04081 1091 Gene3D Ribonuclease Inhibitor 292 392 IPR032675 -
Pste1g04081 1091 Coils Coil 668 688 - -
Pste1g04081 1091 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Pste1g04081 1091 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 497 1089 - -
Pste1g04081 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Pste1g04081 1091 Gene3D Ribonuclease Inhibitor 393 738 IPR032675 -
Pste1g04081 1091 FunFam Serine/threonine-protein kinase-like protein CCR4 889 1091 - -
Pste1g04081 1091 SUPERFAMILY RNI-like 71 452 - -
Pste1g04081 1091 SMART LRR_typ_2 353 377 IPR003591 -
Pste1g04081 1091 SMART LRR_typ_2 544 567 IPR003591 -
Pste1g04081 1091 SMART LRR_typ_2 401 424 IPR003591 -
Pste1g04081 1091 SMART LRR_typ_2 640 665 IPR003591 -
Pste1g04081 1091 SMART LRR_typ_2 208 231 IPR003591 -
Pste1g04081 1091 SMART LRR_typ_2 305 329 IPR003591 -
Pste1g04081 1091 SMART LRR_typ_2 88 112 IPR003591 -
Pste1g04081 1091 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 20 178 - -
Pste1g04081 1091 ProSiteProfiles Protein kinase domain profile. 812 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04081 1091 Gene3D Phosphorylase Kinase; domain 1 784 888 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04081 Pste-Chr1 23828274 23832259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04081 12 1086 Receptor kinase-like Gene Family AT1G73080 49.542 0.0 981
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g04081 Pkinase 5.3e-41 CL0016