Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04065 ATGACTGTCCAACCTTCTTTCTCCCCATCTCTGATTGCTATTATTCTTCTTGTACTACTCCAGCAGCAAACTTGCAGTGCCAAGCAAAGCTCAGACTGTACTTCTCTATGCGGCAAAATTGGCAACATATCATATCCATTTCGACTGAAAGGCGATCCACAGGGCTGTGGCCTCCCAAGGTACGAACTAGATTGTGTGAACAACGTGACAGTGTTAAGTTTGTTTTCAGGGAAATACCATGTGCAAGAAATCAATTACAACAGATACAGAATCAGGTTGGTTGATGCTGGTGTGGTGCAGGACACTGCTTGCTCCATTCCTCACAATTACTTAATCTCAGAGATTTTTGCCGGCATTTCTAGTTATCCTGGTACCTATAAGACGGATCCACTTACCATTTCTGTTGTGCCGGGGTATGGGAAACTGTCTCCAAATGTAGTGTTTCTAAACTGTACTAATCCAGTCACTGATGATCCTCGGTACGTGGAAGTGAGTACTGGTACATGTCATTCCGGAAGCTACATCTATGCCGTTGTTAATGTTATATGTGGGGATATATGCGGAAAGGATGGAACATGCTTCACCAATGAAACCACAGAACAAGTTACTAGATGTGATCGAGGTTGCGATGTTATGGGCATCAACTACAGCATCGACCAGTGTGGAATTCGGTCAAAAATTCCTCGATATATAAGAGGATTTGTTGAAAGAATAAGAAATGTCAAGCAACCACTATCGGGTTGGACTCAATATGCTGAAGGAGAATTCATAGGAGTAAATGTTTTACCTATAATTGTGGCAACTAGATTTGTATTTGGAGTCATACTTTTGCTTGTGTTCTTCATTTATATGTGGCGACGAAGATATTTTTCAATGTACGAGAACATTGAAATATTTTTGCAAGACAATGATCTAAATCCCATCAGATACGAATACAGTGAAATCAAGAAAATGACAGAAGGTTTTAAAGTGAAACTAGGTCAAGGAGGTTTTGGTTCTGTATATAAAGGAAAACTTCGAAGTGGGTTAGATGTAGCAATAAAGATGTTGACCAAATCTGAAGCTAGTGGACAAGATTTTATTAATGAAGTGGCTACCATTGGAAGAATACATCACATGAATATAGTTCGTCTGATTGGATATTGTGTCCAAGGAGAAAAGTGTGCTTTAGTTTATGAATATATGCCTAATGGTTCATTGGATAAACACATTTTCTCTAAAGGAGATAACACTTCTTTAAGTTACGAGAAAACATATGAAATATCTCTTGGCATAGCTCGGGGAATTGCTTATCTACATCAAGATTGTGATGTACAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTTGATGATAACTTTACTCCAAAGGTTTCAGATTTTGGACTTGCAAAACTATTTCCGATCAAGGATAAGTCCATTGTTTTAACTGCAGCAAGAGGAACTTTAGGTTACATGGCTCCAGAATTATTTTACAAAAATATTGGAGGGGTATCATATAAGGCAGACATTTATAGTTTTGGAATGCTTTTGATGGAAATGGGAAGTAAGAGGAGGAACTCAAATCCTCATGCTGAGCATTCAAGCCAAAATTACTTCCCCTTTTGGATCTATGATCAATTTAAAGAAGCAAAAGACATTGACATGGATGATCTTGCCTCAGAAAATGATAAGATTCTAGTGAAAAAGATGTTCATGGTTGCACTTTGGTGTATACAATTAAAACCAAATGACCGTCCTTCAATGAAGAAGGTTGTAGAAATGCTTGAAGGAAAAGTTCAAAGTATTGAAATGCCTCCAAAGCCTGATTATTGTCCATATGACATAATTGAGAATGATGATGATGGAATCAACTCTTACCAAACATCTTGGAGTGATTCAACTAGTTCTAACATGAATCTTAGCAAATCCAATTCCAATCATTCACAGGAGAATAATGTTTGA 1950 0.3738 MTVQPSFSPSLIAIILLVLLQQQTCSAKQSSDCTSLCGKIGNISYPFRLKGDPQGCGLPRYELDCVNNVTVLSLFSGKYHVQEINYNRYRIRLVDAGVVQDTACSIPHNYLISEIFAGISSYPGTYKTDPLTISVVPGYGKLSPNVVFLNCTNPVTDDPRYVEVSTGTCHSGSYIYAVVNVICGDICGKDGTCFTNETTEQVTRCDRGCDVMGINYSIDQCGIRSKIPRYIRGFVERIRNVKQPLSGWTQYAEGEFIGVNVLPIIVATRFVFGVILLLVFFIYMWRRRYFSMYENIEIFLQDNDLNPIRYEYSEIKKMTEGFKVKLGQGGFGSVYKGKLRSGLDVAIKMLTKSEASGQDFINEVATIGRIHHMNIVRLIGYCVQGEKCALVYEYMPNGSLDKHIFSKGDNTSLSYEKTYEISLGIARGIAYLHQDCDVQILHFDIKPHNILLDDNFTPKVSDFGLAKLFPIKDKSIVLTAARGTLGYMAPELFYKNIGGVSYKADIYSFGMLLMEMGSKRRNSNPHAEHSSQNYFPFWIYDQFKEAKDIDMDDLASENDKILVKKMFMVALWCIQLKPNDRPSMKKVVEMLEGKVQSIEMPPKPDYCPYDIIENDDDGINSYQTSWSDSTSSNMNLSKSNSNHSQENNV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04065 649 Pfam Protein kinase domain 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04065 649 Gene3D Phosphorylase Kinase; domain 1 299 394 - -
Pste1g04065 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pste1g04065 649 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Pste1g04065 649 MobiDBLite consensus disorder prediction 620 649 - -
Pste1g04065 649 CDD STKc_IRAK 326 593 - -
Pste1g04065 649 ProSiteProfiles Protein kinase domain profile. 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04065 649 PANTHER RUST RESISTANCE KINASE LR10-RELATED 293 621 IPR045874 GO:0004672
Pste1g04065 649 FunFam PR5-like receptor kinase 395 603 - -
Pste1g04065 649 SUPERFAMILY Protein kinase-like (PK-like) 306 592 IPR011009 -
Pste1g04065 649 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pste1g04065 649 SMART serkin_6 320 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04065 649 FunFam serine/threonine-protein kinase PBS1-like 293 394 - -
Pste1g04065 649 Gene3D Transferase(Phosphotransferase) domain 1 395 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04065 Pste-Chr1 23125850 23138561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04065 13 604 Receptor kinase-like Gene Family AT5G38260 34.959 1.10e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste1g04065 Pkinase 3.5e-49 CL0016