Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04050 TAAGCACTCTTTTTCTTACAGAATGTACTAAGGAAACTAGATTTGCTCTTCACATGTTGTTATGATGCTTTGGTCATTTCATATATTTAATACCATCCTATCATTTTCTGAATTTTTTAGCCCAATTGATCAGTGACAGCTATGGAATTCGATTTTACACTGTGTTTAGCAAAAGAAACAAACCATGGTTGACTTTTCAGACAAAAAAGAAACATAAAGCTTGACTTTTGAATCTGGATTTTTCGTGTTGGATGGAATAACTAATATTCAATGTTACTTTTTTAGGGGTTGTGTGTTGTTCAATATTCTTTAACATGAGAGAGTTTGTGTGGAAATAGCATTTGTATAATTGCAAATTGTCAATAGCAGAAGTTTCCTGCAAAGTTTTGTTTTTCAAGAACCACCTTGGGGTGGTTGCAAGTTTATGAGAGCTATTGGATGATTTCAAGTTGATTCTCAGATATCTGTTTTACATTTTCAGCACTAGGTTTTATCAATTGGAATTTTGGGGAGAAGGGTTACTCTGATGACTTGTTGCTTTCATCTTCTCAGAAAGAAACGATCTTCCTCAGTCACACGATTGACAGGAGTTGAATTAGATGTTTCAGAAATTCAGAATGTCAACATCTACACTTACAGGGAATTGCGAAACGCCACTGAAGGTTTCAGTCCTGCAAACAGGATAGGGCAGGGAGGTTTTGGAGCAGTCTATAAGGGAAGGCTGAGAAACGGTTCTGTGGTAGCTATAAAGGTTTTATCAGCAGAATCAAGACAAGGGGTCCGAGAGTTCCTGACAGAAATCAGAGTGATCTCTAGTATAGAGCATGAGAATCTAGTTAAATTATATGGATGCTGTGTGGAAGACAACCACAGGATCTTGGTATATGGCTATCTTGAGAATAACAGCCTAGCACAAACACTTATTGGTGCAGGCCATAGTAACATCCAATTCAGTTGGCATGTGAGGAGGAACATTTGCATAGGCGTTGCTCGGGGTCTTGCATTCCTTCATGAGGAGGTTCGACCACACATTATTCATAGAGACATAAAAGCAAGCAATGTACTACTTGACAAAGACCTCCAGCCCAAAATTTCAGATTTTGGCCTAGCAAAGCTTATTCCACCAAACCTGACCCATATCAGTACTCGTGTTGCTGGAACAGCTGGTTATCTAGCACCTGAATATGCAATCCGAAATCAAGTGACTAGAAAATCAGATGTCTATAGCTTTGGAGTTCTACTGTTAGAAATTGTTAGTGGGAGGCCTAACACAAACAGACGATTACCTATTGAAGAACAGTATCTTCTTACAAGGGCTTGGGATTTGTATGAGGGTGGGGAGGCAGAAAAATTAGTGGATGCTTTTCTAGGAGGAGACTTCAACATTGATGAGGCAGTCAGATTTTGTAAGATTGGTCTCCTTTGCACGCAGGATTCTCCTCAGCTCCGGCCCTCAATGTCCTCCGTGCTTGAGATGCTTTTAGGTGAAAAAGATGTGAAGGAGGAGGATGTGACAAAACCAGGCATGATATTTGAATTTGTAGAAGCCAAAAGTGCAGGTAAACAAAAAGGCAAGGCTGAAGTGGATAGTAAATCTTCGTTGACTGAAGGGAAGCAAGATGATTCATGTTCATCAGGAACCATGAGCTCTTTTCCTACCATGACCTTCACAGCAATTTATGATAGAAGCAATTAATTTGATTGTCACTACGTAGTCTTTTATCTGGCATTTAGTGATTTTTTTCTCTCCCCCTTCTAGTTGTGAATCTTTTCTGCCTTTGTAGGGTACAAATCAGAATGTAAAATTTTTATTTCATATATTCTTCTCATGCTATATTAATCAATGGTGATGAGTTCAGTTTTGGAATCCTACAGTCATAGAGTCAAGCAAAACTTTTGTGAGAAAGGAATGTCATTGGTCTATCTAGACCATATACCACACTTTTTTGAATGGGGGCATTGTTTATTTTTGGTTTTTTGTGGCTCTTATGCTGGTCTTTGTTTAGGAATAATGTTTGTTCATACATCATACTTCCCTGGTGTATGCAAATTGTAATCTGTTTGTTTAAGAATGCATCATACTTCTCA 2088 0.3836 MTCCFHLLRKKRSSSVTRLTGVELDVSEIQNVNIYTYRELRNATEGFSPANRIGQGGFGAVYKGRLRNGSVVAIKVLSAESRQGVREFLTEIRVISSIEHENLVKLYGCCVEDNHRILVYGYLENNSLAQTLIGAGHSNIQFSWHVRRNICIGVARGLAFLHEEVRPHIIHRDIKASNVLLDKDLQPKISDFGLAKLIPPNLTHISTRVAGTAGYLAPEYAIRNQVTRKSDVYSFGVLLLEIVSGRPNTNRRLPIEEQYLLTRAWDLYEGGEAEKLVDAFLGGDFNIDEAVRFCKIGLLCTQDSPQLRPSMSSVLEMLLGEKDVKEEDVTKPGMIFEFVEAKSAGKQKGKAEVDSKSSLTEGKQDDSCSSGTMSSFPTMTFTAIYDRSN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04050 389 SMART serkin_6 47 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04050 389 Pfam Protein kinase domain 50 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04050 389 MobiDBLite consensus disorder prediction 343 361 - -
Pste1g04050 389 Gene3D Phosphorylase Kinase; domain 1 20 122 - -
Pste1g04050 389 SUPERFAMILY Protein kinase-like (PK-like) 25 318 IPR011009 -
Pste1g04050 389 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Pste1g04050 389 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 330 - -
Pste1g04050 389 CDD STKc_IRAK 53 318 - -
Pste1g04050 389 Gene3D Transferase(Phosphotransferase) domain 1 123 334 - -
Pste1g04050 389 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 357 - -
Pste1g04050 389 MobiDBLite consensus disorder prediction 342 376 - -
Pste1g04050 389 ProSiteProfiles Protein kinase domain profile. 47 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04050 389 FunFam cold-responsive protein kinase 1 19 122 - -
Pste1g04050 389 MobiDBLite consensus disorder prediction 362 376 - -
Pste1g04050 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04050 Pste-Chr1 22800364 22804621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04050 35 331 Receptor kinase-like Gene Family AT1G53430 56.229 2.32e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g04050 Pkinase 1.4e-47 CL0016