Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04032 AGAGATCTCATTGATAATCAAAAGGTACAAGTCATTATAGGACCACAAACATGGGCTGAGACATCTTTAGTGGCTGAAGTCTGTACCCAAAAGAGCATACCCCTCCTTTCTCTTGCAGATGCAACTCCACAATGGTCAATAAAGAAGTGGCCCTTCCTGCTTCAATGCTCACCTAACCAAATTATGCAGATGAAAGCAATTGCTGAAATTGTGAAGTCTTGGAAACTCTACAATATTACCATGATATATGAAGATGGAGATTCATCATCCACTGAAGTTTTGTCTCAGCTCTCTGGAGCTCTTACAGAAGTTGGCACAAAATTAACCAATGTTATAGCAATTCCACCTCTGGTTTCTTCTTCATTGTCCAAACAACTTGAGATGCTAAGAGAAGGACAATGCAAAGTTCTTATTGTCCATTTGTCCTTTCCTTTGGCACTACACCTGTTTGAAACAGCAAAACGAATGAATTTGATGGGTGGAAGTAATGTATGGATTACTACTAGTACCTTTACAAGCCTTGTCCATTCCTTGAACGCATCCACTATCTCCAATATGCAAGGGATTATTGGAGTCAAGAGCTATATCCCACAGCTACGGCCCCAATATGCAAACTTCTATCATAGATTTCGGAAAAAATTTTGCTCAGAGAATTTTGAAGCGTTTAATTATGAGCCTGGAATCTTTGCATCCCAGGCTTATGATGCTGCATGGATTGTGGTTCATGCAATGAGTGAAACCAACCAAAAAGGGGGTCAACTTTTGCTAGATAAGATTTTACTTAGTAATGTTACTGGCTTAAGTGGAAAAATTGAGTTCACTGATAATATATTAGCTCCAGCACATACCTTTCGAATCATTAATGTGATAGGGAGGAGCTACAGGGAAATAGGTTTCTGGTCAAATGGACTTGGTTTCTCAAAATCTTTGGATCAAAATGCTTCTCGCAGTTCTTCAGTGGGGGATTTAGGAAAAGTAGTTAATCCAACATGCTCAATACGACTAAGAATTGGTGTCCCCTCCATATCAGTATTCAAACAGTATGTCAATGTAATTCCAGATCATTCTAAAAATATCACTTCCTTCAAGTTCAATGGATTTGCTATAGATCTTTTTGAAGAAGCAATAAAAGAATTGCCTTACCATTTGGAATATGAGTATGTGGCCTTTAATGGCACCACATATGATGAATTGGTGGAGAAAGTTTACCGGAAGGAATATGATGCAGTTGTTGGTGATGTAGCAATACTGTCCACACGTTATGAATATGTTTCATTCACTCAGCCCTATACTGATTCGGGAGTGGTGATGATTGTTCCTGTTAAATCAAAGACAGGCAATAGAGCGTGGCTATTCATGAAGCCTTTCACAAAGCTCATGTGGGTTCTAATATTGGTCATAATTGTCTACAATGGCTTTGTTATATGGTTGATTGAAAGAAACCACTGCCCTGAACTGAAGGGCCCTATTCTGCATCAAACCACAGCTATGCTGTGGTTGGCTTTCTGTTCCCTATTCTCTTTGAAT 1527 0.3903 RDLIDNQKVQVIIGPQTWAETSLVAEVCTQKSIPLLSLADATPQWSIKKWPFLLQCSPNQIMQMKAIAEIVKSWKLYNITMIYEDGDSSSTEVLSQLSGALTEVGTKLTNVIAIPPLVSSSLSKQLEMLREGQCKVLIVHLSFPLALHLFETAKRMNLMGGSNVWITTSTFTSLVHSLNASTISNMQGIIGVKSYIPQLRPQYANFYHRFRKKFCSENFEAFNYEPGIFASQAYDAAWIVVHAMSETNQKGGQLLLDKILLSNVTGLSGKIEFTDNILAPAHTFRIINVIGRSYREIGFWSNGLGFSKSLDQNASRSSSVGDLGKVVNPTCSIRLRIGVPSISVFKQYVNVIPDHSKNITSFKFNGFAIDLFEEAIKELPYHLEYEYVAFNGTTYDELVEKVYRKEYDAVVGDVAILSTRYEYVSFTQPYTDSGVVMIVPVKSKTGNRAWLFMKPFTKLMWVLILVIIVYNGFVIWLIERNHCPELKGPILHQTTAMLWLAFCSLFSLN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04032 509 Gene3D - 449 508 - -
Pste1g04032 509 Gene3D - 6 281 - -
Pste1g04032 509 FunFam Glutamate receptor 331 448 - -
Pste1g04032 509 FunFam Glutamate receptor 63 224 - -
Pste1g04032 509 SMART GluR_14 336 504 IPR001320 GO:0015276|GO:0016020
Pste1g04032 509 Pfam Receptor family ligand binding region 4 290 IPR001828 -
Pste1g04032 509 CDD PBP1_GABAb_receptor_plant 2 310 IPR044440 -
Pste1g04032 509 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 504 IPR015683 -
Pste1g04032 509 Pfam Bacterial extracellular solute-binding proteins, family 3 363 443 IPR001638 -
Pste1g04032 509 Gene3D - 59 300 - -
Pste1g04032 509 Gene3D - 333 448 - -
Pste1g04032 509 SUPERFAMILY Periplasmic binding protein-like I 2 302 IPR028082 -
Pste1g04032 509 SUPERFAMILY Periplasmic binding protein-like II 362 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04032 Pste-Chr1 22390963 22393305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04032 2 502 Ion Channels AT5G27100 29.499 3.17e-75 253