Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04029 AGAGATCTCATTGATAATCAAAAGGTTCAAGCCATCATAGGATCACAAACATGGGCAGAGACATCTTTAGTGGCAGAAATCTGTACCCAAAAGAGCATACCTCTCCTTTCTCTAGCAGATGCAACTCCAGAATGGGCAATGAAGAAGTGGCCTTTCCTGCTGCAATCCTCACCTACCCAAATTATGCAGATGAAAGCTATTGCTGAAATTGTGAAGTCTTGGAAACTCTATAATGTTAGCATGATATATGAAGATGGAGACTCATCATCCACTGAAGTTTTGTCTCAGCTCTCTGGAGCTCTTACTGAAGTTGGCACAGAATTAAGCAATGTTCTAGCCATTCCACCTCTAGTTTCTTCTTCATTGTCCCAACAACTTGAGAAGCTAAGAGATGGACAATGTAGAATCTTTATTGTCCATTTATCCTTTCCTTTGGCACTGAACCTATTTGAAGCTGCAAAAATAATGAATATGATGGGGGGAGGTAATGTATGGATTACAACTGGTACCTTCACAAGCCTAGTTCATTCCTTGAATGCATCCACTATTTCCAATATGCAAGGCGTCATTGGAGTCAAGAGCTACATACCAAAACTATTGCCTCATTATGCAGACTTTTACCATAGATTTAGAAAATTATTTTGCTCAGAGAATTTTGAAGAGTTTAATTACGAGCCTGGGATCTTTGCAGCCCAAGCTTATGATGCTGCATGGATTGTGGTCCATGCCATGAGGGAATCCAACCAAAAAGGGGGTCTTTTGCTAGATAAGATTTCGCTTAGTAATTTTACTGGCTTAAGTGGAAAAATTCAGTTCATTGAACATAAAAGAGCTCCAGCACATACTTTTAAAATCATTAATGTGATTGGGAGGAGCTACAGAGAAATTGGGTTCTGGTCAAATGGACATGGTTTCTCAAAATTATTGGATCAAAATGCTTCTTACAGTTCTTCGGTGAAGGAATTAGGAAAAGTAGTTAATCCAACATGTTCCATACGACTAAGAATTGGTGTCCCCTCCATGTCAAACTTTAAACAATATGCAAATGTTATTCAATATCATTCTGAAAATGTTACTTCCTTCAAGTTCAAGGGATTTTCCATAGATCTTTTCGATGAAACAATAAAAAATTTGCCATATCATCTGGAATATGATTATTTTGCCTTTAATGGCACATATGATGAACTAGTGAAGCAAGTTTATTGGAAGAAATACGATGCAGTTGTTGGTGATGTATCAGTAGTGTCCTCGCGTTATGAATATGTTTCATTCACTCAGCCCTACACTGATATGGGACTGATGATGATTGTTCCTGTTAAATCAAAGACAGGCAACAGAACATGGCTGTTCATGAAGCCTTTCACAGAACTCATGTGGGTTCTAATATTGGTCATCATTGTCTACAATGGTTTTGTTGTATGGATTATTGAAAGAAACCACCGGCCTGATGAACTGAAGGGACCTATTCTGCATCAAACCACAACTATGTTGTGGTTGGCTTTCTGTTCTTTGTTCTCTTTGAATGGGGACAGATTGCATAGCAATTTATCAAGGGTGGCAATGGTGGTATGGCTTTTTGTGGCTCTAATCATTACACAGACTTATACTGCTAGCCTTGCCAGCAAGTTGATTGTTGAACAATTTGAACCAACTGTAGACAGCATTCAGAAGCTAAAGAACAACAATGCCATGGTAGGATTTGATAGAGGATCATACTTGGAAAGATATCTCCAGGATGCATTGGGAATCAGTGCCAAAAACATCAAGCAATTTGACTCACAGGAGAGCCTTGCTGATGCCCTAAGAAACAAAGAAATAGCAGCTGTCTTCCTTGATGTTCCTGTGGCAAAACTTTTCCTTGCCAAGCACTGTAAGCGGTTTGTTCAAGCAGGGCCTACATACAAGATTGGAGGATATGGA 1920 0.3911 RDLIDNQKVQAIIGSQTWAETSLVAEICTQKSIPLLSLADATPEWAMKKWPFLLQSSPTQIMQMKAIAEIVKSWKLYNVSMIYEDGDSSSTEVLSQLSGALTEVGTELSNVLAIPPLVSSSLSQQLEKLRDGQCRIFIVHLSFPLALNLFEAAKIMNMMGGGNVWITTGTFTSLVHSLNASTISNMQGVIGVKSYIPKLLPHYADFYHRFRKLFCSENFEEFNYEPGIFAAQAYDAAWIVVHAMRESNQKGGLLLDKISLSNFTGLSGKIQFIEHKRAPAHTFKIINVIGRSYREIGFWSNGHGFSKLLDQNASYSSSVKELGKVVNPTCSIRLRIGVPSMSNFKQYANVIQYHSENVTSFKFKGFSIDLFDETIKNLPYHLEYDYFAFNGTYDELVKQVYWKKYDAVVGDVSVVSSRYEYVSFTQPYTDMGLMMIVPVKSKTGNRTWLFMKPFTELMWVLILVIIVYNGFVVWIIERNHRPDELKGPILHQTTTMLWLAFCSLFSLNGDRLHSNLSRVAMVVWLFVALIITQTYTASLASKLIVEQFEPTVDSIQKLKNNNAMVGFDRGSYLERYLQDALGISAKNIKQFDSQESLADALRNKEIAAVFLDVPVAKLFLAKHCKRFVQAGPTYKIGGYG 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04029 640 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 3 640 IPR015683 -
Pste1g04029 640 SUPERFAMILY Periplasmic binding protein-like II 362 640 - -
Pste1g04029 640 Pfam Ligand-gated ion channel 458 611 IPR001320 GO:0015276|GO:0016020
Pste1g04029 640 Gene3D - 61 200 - -
Pste1g04029 640 SMART GluR_14 333 640 IPR001320 GO:0015276|GO:0016020
Pste1g04029 640 Pfam Receptor family ligand binding region 4 289 IPR001828 -
Pste1g04029 640 SUPERFAMILY Periplasmic binding protein-like I 2 304 IPR028082 -
Pste1g04029 640 FunFam Glutamate receptor 330 446 - -
Pste1g04029 640 Gene3D - 447 573 - -
Pste1g04029 640 FunFam Glutamate receptor 447 586 - -
Pste1g04029 640 Gene3D - 201 278 - -
Pste1g04029 640 FunFam Glutamate receptor 63 224 - -
Pste1g04029 640 CDD PBP1_GABAb_receptor_plant 2 309 IPR044440 -
Pste1g04029 640 Gene3D - 330 446 - -
Pste1g04029 640 Pfam Bacterial extracellular solute-binding proteins, family 3 362 629 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04029 Pste-Chr1 22369090 22373368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04029 2 640 Ion Channels AT2G29120 31.871 2.10e-101 328