Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04008 GAAGAAATAAGGCAGGGGACTCCATTATTAAACAGACAAAAACACAGACAGAGCATACTTGGTTCGATTCCAGTTTGGAACGAAGCAAAGTTCCGAACTCAACCCAAAAGCCCCAACTTTGAATTCACCAATCTCTCTCTCTCTCTCTGTGCCTTAATCTTCCTCTTTGGGGCAGTGTGTGAGGTTCTGAAGGCTGGTCTGGCTGAGGCTGCTGGGGCAAGATTTAGTTCATTGGAGCTCATTGGGCAGGGATCATTTGGCGATGTGTATAAAGGGTTTGACAGGGAGCTCAACAAAGTAGTTGCTATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATCATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTCCAACCAGGTCCCCCACTTGATGAAATGTCAATTGCTTGCATTCTACGTGATCTGCTTCATGCGATTGATTACCTACATAGTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTACTGACTGAGAATGGTGAAGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGAACTATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAACTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATTACTGCAATAGAGATGGCAAAAGGGGAGCCACCACTTGCTGATCTTCATCCAATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCACCACAACTAGATGAACACTTCTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGCTCCTGGCGAGAGGCCAAGTGCTAAGGAGCTTCTAAAACATCGTTTCATCCGGAATGCTCCTAGGAAGAGTCCAAGGCTATTGGAGAGAATAAGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATCAGGCAACACCTAGAAATGCCCCAAGGGGGATGGGGGAGGCATATGATACTATTAAGGTTGCAAAAGATTCTAGGGGTGATGAAACTAATCAGCCTAGTGACCAAGGTAAAACCCAGAAAAATTCTGGGTGGGACTTCAGCATTGGTGCATCACAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAGTTTAGAGATAAGAAGACTGAAGTTTCAAATAATCAGCATAACCAGAGAAAAAGTTCAGAGACTGGCTATCAAGGGGGATATGCCAATAAAAGTGCACTTAATGAGTCACTGGAAACTTCTTTTGGAAAAGATCATGGAGTTCCCTACCATGATGAACATCCAGATAATCACCTTGAAGATGATGAATTATCTGGGAATGGATCTGGAACTGTTGTTATTCGGTCTCCAAAAATATCACAGTCGTCACTCTTTCGTGACCAAAGTTCCCGGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGCTTCTACTGGTGGAACTGTTGTTTTCCGTAGCCAGTACGATGATTCAGATTCTCCACAAACACCTAGGTCCCGACTGGGACTTAATAGCAGAAATTCAATTGCGTCACTGGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAAGCGGATTAAGGAAAGTGAATGTTAGGGAGAGATTTGTGCTGGGAAAACTCAACAATGATGTACAGGAAAGCAGGAGAGATCAAATGTCAAGCAGTTTTGATTCTTCCAGATCATCCCGGGAATACATCGATTCACAGAAAGGAAGTTCAAGATCACATTGTACTATTGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCAGTGCCGTTATCTGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCAGATGATCCAGATGGGTCAATTGTGCAAATTGTTACCAATGCTCTTGTAGACATGGAGAGGACAAAGCCCCAATCCTCTGATGTTCTTGTGAAAAAATTGCTTCAGCGTTTGGCAAGTTCTAAGGAATCTTCATTGAAGGACCTGCAAGAACTAGCTGGCCAAACATTCACCAAGACCAAGTCAGCTGAAGAAACTCGAAATGCAGAGCCTGATAACAAGAAGAAACAAAACAAGGAAGTTCATTCAAACAGCAATTTAAGCCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCCCGGGATCTAAATACAACTTGAATGGAGTTAAAAGTTAAATTTTGTGTGGAGTTTTTGTTTCTACATTTATTCTGATTAAATGTACATATGTTATTAATATATATATTTTTTTCTACATAAATTTTTCGTTATAGTGATAATGGCACACCA 2415 0.4133 EEIRQGTPLLNRQKHRQSILGSIPVWNEAKFRTQPKSPNFEFTNLSLSLCALIFLFGAVCEVLKAGLAEAAGARFSSLELIGQGSFGDVYKGFDRELNKVVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQPGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLTENGEVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKAPGERPSAKELLKHRFIRNAPRKSPRLLERIRERPKFQIKEDQATPRNAPRGMGEAYDTIKVAKDSRGDETNQPSDQGKTQKNSGWDFSIGASQGTGTFRSVSRPPQFRDKKTEVSNNQHNQRKSSETGYQGGYANKSALNESLETSFGKDHGVPYHDEHPDNHLEDDELSGNGSGTVVIRSPKISQSSLFRDQSSRSSSSYASFEDASTGGTVVFRSQYDDSDSPQTPRSRLGLNSRNSIASLEDSATNLAEAKAAIQSGLRKVNVRERFVLGKLNNDVQESRRDQMSSSFDSSRSSREYIDSQKGSSRSHCTIDDEESAKIISSSVPLSVLLIPSLKEAIADDPDGSIVQIVTNALVDMERTKPQSSDVLVKKLLQRLASSKESSLKDLQELAGQTFTKTKSAEETRNAEPDNKKKQNKEVHSNSNLSPLARFLLSRWQGQTSRDLNTT 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04008 761 MobiDBLite consensus disorder prediction 429 444 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 336 444 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 457 548 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 336 351 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 593 608 - -
Pste1g04008 761 Pfam Protein kinase domain 76 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04008 761 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 71 710 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 461 479 - -
Pste1g04008 761 Gene3D Transferase(Phosphotransferase) domain 1 72 360 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 592 625 - -
Pste1g04008 761 SUPERFAMILY Protein kinase-like (PK-like) 74 328 IPR011009 -
Pste1g04008 761 MobiDBLite consensus disorder prediction 709 738 - -
Pste1g04008 761 FunFam serine/threonine-protein kinase dst1 isoform X1 72 361 - -
Pste1g04008 761 CDD STKc_MST3_like 74 346 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 368 382 - -
Pste1g04008 761 ProSiteProfiles Protein kinase domain profile. 75 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04008 761 SMART serkin_6 75 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g04008 761 MobiDBLite consensus disorder prediction 383 413 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 609 625 - -
Pste1g04008 761 Coils Coil 101 128 - -
Pste1g04008 761 ProSitePatterns Protein kinases ATP-binding region signature. 81 104 IPR017441 GO:0005524
Pste1g04008 761 MobiDBLite consensus disorder prediction 485 548 - -
Pste1g04008 761 MobiDBLite consensus disorder prediction 715 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04008 Pste-Chr1 21897358 21911590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04008 65 758 MAP Kinase Kinase Kinase Kinase AT3G15220 65.423 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pste1g04008 Pkinase 1.5e-68 CL0016