Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04006 AAAAAAAGAAGAGCATGAGAGTGGTAATGTATAGTATATGTGTGAGAGAGTAGAATAAAGGGTGAAGAAGTGAAAGTGGGGACAGGTGAAGCAAAGTGGTGAATGACAGAGAGGCACGTGTAGGAAGGAACGCGTCTTGGTAACTGCGACGTACTCGGCGTGGTATTGGGAAGTAGCAAAAACTGGTGTCAACGCGACAATTATCCTCATCATCATCTCACTCTCTTCTCTTTTCTTCCACCCTTCTCTTCTCTCCCTCATTGTGTCACCGATTAAATATACATAAAAAACAACACTCTCTCCCTCTTCTTAAATCTCTATATAAACCCTTCTCCCTCTTTACTATGACCACCGGCAAAGAGATTTTTCATAAGATGAAGGAAAAGGTTTTGGGTTCATCTGATTCTGATTCTGGTAAAGGAAAGAGCAAAATGAAGAAGCACATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCAGGTCATGCCATGGAAGACTATGTTGTTGCTCAATTTAAGCAAGTTGACAACAACGAGTTGGGTTTATTTGCAATATTTGATGGCCATTCAGGTCACAGTGTACCTGATTACTTGAAGTCTCATTTATTTGATAATATCTTGAAAGAGCCTAACTTTTGGACAGAACCTGCTGATGCTGTCAAGAGAGCATATAGTAGAACTGATTCTACTATTTTAGAAAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTGATCAACTGTCAAAAGCTAGTGGTGGCCAACATAGGGGATTCCCGGGCTGTCATATGCAAGAATGGCGTAGCCAAGCAACTATCAGTGGATCATGAACCGAGTGTAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTTCCACGTGTTGATGGTCAGTTAGCAGTGTCGAGGGCATTTGGTGACAAAAGCCTGAAGATACATTTGAGCTCAGAACCACATGTAATTGTGGAGGTGATAACTGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGGTTATGGAAGGTAATGACAAATCAACAAGCAGTTGATGCTATCAGAGATGTTAAGGATGCTCGATCTGCTGCAAAGATCCTTACTGAAGAAGCACGTACCAGGAAAAGCACAGATGATATCTCTTGCGTTGTTGTGAAATTTCAGTGATCACAGAACTTACGTAGTAGATTTTTATCTACCAACTTGAAAGTGTAACATACTTTAGTATATATGGATAAATGTGGATACCCTTTAGGTGTTACTATGTCAAGTCATTCAGTGTGTGATATTTTATCCGCTTTCATACAAATCAACTGTCTGAGAATGTGTTGTTTGATGCAACAATGTAAAAAGCATTTAGTTTTGGAATGTGCAGACCAAAATAATTCGCATGATTGCAAGGGAGTTTGGTCAATCTCTATCCTCTTGAAAGTAGCATTTATGAAATTCCTGCTTAGCCATTTATGTTTACACCATCCATTTGTGATGATTGATGATATCGTACAAAGTTAAGATTTATGATG 1552 0.395 MTTGKEIFHKMKEKVLGSSDSDSGKGKSKMKKHITHGFHLVKGRSGHAMEDYVVAQFKQVDNNELGLFAIFDGHSGHSVPDYLKSHLFDNILKEPNFWTEPADAVKRAYSRTDSTILEKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVICKNGVAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKIHLSSEPHVIVEVITDDAEFVILASDGLWKVMTNQQAVDAIRDVKDARSAAKILTEEARTRKSTDDISCVVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04006 283 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Pste1g04006 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Pste1g04006 283 PANTHER PROTEIN PHOSPHATASE 27 282 IPR015655 GO:0004722|GO:0006470
Pste1g04006 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Pste1g04006 283 Gene3D - 14 283 IPR036457 -
Pste1g04006 283 SMART PP2C_4 25 280 IPR001932 -
Pste1g04006 283 Pfam Protein phosphatase 2C 48 275 IPR001932 -
Pste1g04006 283 CDD PP2Cc 36 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04006 Pste-Chr1 21872680 21877338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04006 3 283 PP2C-type Phosphatase Gene Family AT3G15260 75.694 1.27e-162 451