Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04004 CAGCAGAAGTAAGTGTGGTGACAGTGATGATAGCTATGATTACATTATGGGCAGTGCGAGTGGTGAACTGGGTGTGGCTTAGGCCAAAGAGGTTTGAAAAGCTTCTGAGAGAACAAGGTCTTAATGGTGAACCATACTCACTTTCTTTTCACAAATCCATCCATTCTGATATTCAACAAGACCACACCAATTCCCCACCTTTTCCTCTCTCCGATCATGTTGCGCCTTGTGTTTCCTCCTCGGTACACCGTACCATCGCCAAACATGTCATCATTACCGACCCAAATCAAATCAAAGAAGTCTTTAACAACATTCATGACTTCCACAAACTAAAGTTTAGTGGCATTACCAAGTTATTCGTCAATGGTCTCCTCACTTATGAGGGTGAGAAGTGGGCTAAACATCGAAGGATTACCACCCCAGCATTTCGTTTAGAAAAGTTGAAAAATATGTTACCAGCATTTTCTCAAAGCTGTCATGATATGATTAGCACGTGGAAAGGAATATTGGCATCAGATGGAAAATGTGAAATTGACCTTTGGCCCTTCTTTCGAAAATTGACTAGTGATGTAATTTCTAGAACAGCATTTGGAAGTAGTTATGCAGAAGGAGAAAAAATATTTCAACTTCTGCAAATGCAAGGGTATCTTGTAACTACTTCCATTATCGAGAACGTACCAGCATTACGGTATATACCAACAACAACCAAAAGGAGGATGCTAGCAATGGAAAGAGAGGTGCATGATTTAATTGAGGCTATCATAAAAAAACGTGAGAAAGCCATGAAAAATGGTGAAGCCTACAATGAAGATTTATTAACCATGTTTTTGGAATCAAATGACATGGAAATCCGAGGTCATGAAAATAGTAGGAGTGTTGGAATGACAAACCAAGAAGTGATTGAAGAATGCAAGCTATTCTACACAGCAGGACAAGAAACCACTTCAATATTGCTGTGTTGGACTATGGTCTTATTGGCTAGGTATCCTCAATGGCAAGCACGAGCAAGGGAGGAAGTTTTTCAAGTTTTTGGACACCAAAATCTGCACTTTGATGGGTTAAGTCAACTTAAAATTATGACCATGATTTTATACGAGGTTCTGAGGTTATACCCTCCATCAATTTTCTTCACTCGTACACTTCAAAAGGACGTGAAACTTGGAAATGTATCTTTACCTGCAGGAATACACATTACCATGCCAATTTTATTTGTGCACCAAAATGAGGATATTTGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTCTCTGAAGGAATTGCTAAGGCAACAAATAAAGGCCAAGTTTCGTTTTACCCATTTGGTTGGGGTCCTAGAATATGCATTGCCCAAAACTTTGCCTTATTGGAAGCCAAGATAGTGTTTTCACTGCTTTTGCAACATTTCTCATTTGAGCTTTCTCCAAGTTATGCACATCATCTAACATTCCTGCTTGGTATACAGCCAAAACATGGGGCACACATTGTTTTGCACAAACTA 1502 0.3948 MIAMITLWAVRVVNWVWLRPKRFEKLLREQGLNGEPYSLSFHKSIHSDIQQDHTNSPPFPLSDHVAPCVSSSVHRTIAKHVIITDPNQIKEVFNNIHDFHKLKFSGITKLFVNGLLTYEGEKWAKHRRITTPAFRLEKLKNMLPAFSQSCHDMISTWKGILASDGKCEIDLWPFFRKLTSDVISRTAFGSSYAEGEKIFQLLQMQGYLVTTSIIENVPALRYIPTTTKRRMLAMEREVHDLIEAIIKKREKAMKNGEAYNEDLLTMFLESNDMEIRGHENSRSVGMTNQEVIEECKLFYTAGQETTSILLCWTMVLLARYPQWQARAREEVFQVFGHQNLHFDGLSQLKIMTMILYEVLRLYPPSIFFTRTLQKDVKLGNVSLPAGIHITMPILFVHQNEDIWGDDAKEFKPERFSEGIAKATNKGQVSFYPFGWGPRICIAQNFALLEAKIVFSLLLQHFSFELSPSYAHHLTFLLGIQPKHGAHIVLHKL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04004 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Pste1g04004 492 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 Gene3D Cytochrome P450 51 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 SUPERFAMILY Cytochrome P450 78 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g04004 492 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 485 - -
Pste1g04004 492 Pfam Cytochrome P450 79 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04004 Pste-Chr1 21813790 21817936 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04004 11 492 Cytochrome P450 AT3G14680 49.000 2.53e-173 496