Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03995 ACCACAATGTGTAGAAATTGTTCAATAGATAATGAACATATTGGGTCCAAAGTTTTCTTCTCTTCCGAAGATGGTCTAGTTGGGTTGGAATCTCGTGTTGCGGAATTAGCAAACCTTTTCTGTTTTGTGTCAGTTGATGATGTTCGAGTTGTCAGAAATAGTGGGATGGGTGGAATAGGAAAATCAACTCTTGCTCGTGCTTTATATGAAAGAATCTCTCAACAATATGGTTCTTGTTGTTTCATTGATGATGTAAGCGAAATTTATAGAGATTCTACTAGAATTGGTACACAAAAACAATTACTTTCTCAATCTCTAAATGAGAAAAATCTAGAGATTTGCAATATTTCTGAAGGAACATATTTGGTATGGAAGAAGCTACGCAATGCAAAGGCAATTACAGTTTTTGATAATGTTGATCAAATTGAACAACTCAATATGTTTATAGGGAATAGAGAGACTTTATTACGTGAATGCCTAGGTGGAGGGAGCAGAATCATCATAATTTCTAGGGATGAACATATATTGAAGACATACGAAGTTGATGATATACAAAATCTGATATGGGATGTACTATCAGATGCTCAAGGCAACCCTTGGCAATTGAAGTATTGGGTTGTAATGTCTTACAAAAGTGCATTGGCTATGTTAGGAGAAAATGAAAGTACAAAGATTATGGATGTACTCCGAATAAGTTTTAATGAGCTAGAACAGACAGAGAAGGAAATATTTCTAGATATTGCTTGCTTTTTCCATGGTTACAGAGAACAAGATGTGAAAGAAATTCTACATTTTCGTGGATTTCATCCTGAATATGGCCTTAGAGTTCTTGTTGATAAATCACTCATAACCATAACCATTGATTTCTTTGGACGATTTGGTAAGTGTATTGTTAGAGAAAAATCACCTAAAGAGCCAAGAAAGTGGAGTAGGTTGTGGGATTACCAAGATCTCCACAAAGTTATGACAAACAACATGACAGCAGAAAATCTTGAAGCCATAATTATTCATCATGCTCTAAGGGGAACAACAATGAGCGTTGATGCTTTATCCAAACTAAGTCACCTTAAGTTGTTCACACTTGAGGAAATTGATTATTCTGTTTTAAAAGATGAAGTCTCAGATTATCTTTCCAATGAATTAGGATATCTTATTTGGGATAAATATCCTTTCAAATGTATAAAATTGCAACAGATTGATGCACCTATTGGTCTTTTAAGAAAATTGACTTGTTTAAATTTGAAAGGCTGCAAAAGTATTATCAAGCTACCACATTTTGGAGAGGGCCTTAATCTAGAGACTCTAAACATGGAAGGATGTACACAACTCAAGCATATTGATCCTTCCATTGGTTTTCTAAGAAATCTTACCTATTTGGTATGGACAGACTGCAAAAGTATTGTTAAGTTACCACATTTTGGAGAGGGCCTTAATGTAAAGAAGCTAGAAATGAGAGGATGTACACAACTTAAGCAGGTTGATCCATCCATTGACCATCTTAAAAAGCTTACTCTTTTGGATTTGACAAATTGCAAAAATCTAGTAAGCTTACCAAATACCATACTGAGCTTCGATTCTCTTGAATCTTTGAGGCTCTCTGAGAGCTCAAAA 1611 0.3482 TTMCRNCSIDNEHIGSKVFFSSEDGLVGLESRVAELANLFCFVSVDDVRVVRNSGMGGIGKSTLARALYERISQQYGSCCFIDDVSEIYRDSTRIGTQKQLLSQSLNEKNLEICNISEGTYLVWKKLRNAKAITVFDNVDQIEQLNMFIGNRETLLRECLGGGSRIIIISRDEHILKTYEVDDIQNLIWDVLSDAQGNPWQLKYWVVMSYKSALAMLGENESTKIMDVLRISFNELEQTEKEIFLDIACFFHGYREQDVKEILHFRGFHPEYGLRVLVDKSLITITIDFFGRFGKCIVREKSPKEPRKWSRLWDYQDLHKVMTNNMTAENLEAIIIHHALRGTTMSVDALSKLSHLKLFTLEEIDYSVLKDEVSDYLSNELGYLIWDKYPFKCIKLQQIDAPIGLLRKLTCLNLKGCKSIIKLPHFGEGLNLETLNMEGCTQLKHIDPSIGFLRNLTYLVWTDCKSIVKLPHFGEGLNVKKLEMRGCTQLKQVDPSIDHLKKLTLLDLTNCKNLVSLPNTILSFDSLESLRLSESSK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03995 537 Gene3D - 15 184 IPR027417 -
Pste1g03995 537 SUPERFAMILY "Winged helix" DNA-binding domain 223 322 IPR036390 -
Pste1g03995 537 Gene3D Ribonuclease Inhibitor 319 537 IPR032675 -
Pste1g03995 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 521 IPR044974 GO:0006952
Pste1g03995 537 PRINTS Disease resistance protein signature 126 140 - -
Pste1g03995 537 PRINTS Disease resistance protein signature 50 65 - -
Pste1g03995 537 PRINTS Disease resistance protein signature 498 514 - -
Pste1g03995 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 247 IPR027417 -
Pste1g03995 537 SUPERFAMILY L domain-like 345 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03995 Pste-Chr1 21593113 21596249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03995 26 533 WRKY Transcription Factor Family AT4G12020 25.500 8.11e-41 156